LINC00555

Summary

LINC00555 (long intergenic non-protein coding RNA 555, HGNC:43699) is a long non-coding RNA gene on chromosome 13q33.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43699
Approved symbol	LINC00555
Name	long intergenic non-protein coding RNA 555
Location	13q33.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261057
Ensembl biotype	lncRNA
Entrez	100861543
RNAcentral	URS00005CF3D9 — lncRNA, 442 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000569288

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000569288 — 1 exons

Exon	Start	End
ENSE00002604186	102589372	102589813

Expression profiles

Bgee: expression breadth broad, 70 present calls, max score 61.54.

Top tissues by expression

70 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	61.54	gold quality
placenta	UBERON:0001987	60.83	gold quality
islet of Langerhans	UBERON:0000006	58.50	gold quality
monocyte	CL:0000576	55.40	gold quality
liver	UBERON:0002107	53.06	silver quality
blood	UBERON:0000178	51.81	gold quality
gastrocnemius	UBERON:0001388	50.84	gold quality
calcaneal tendon	UBERON:0003701	48.76	silver quality
left coronary artery	UBERON:0001626	47.91	gold quality
heart	UBERON:0000948	47.26	gold quality
fallopian tube	UBERON:0003889	47.12	gold quality
myometrium	UBERON:0001296	47.11	silver quality
heart left ventricle	UBERON:0002084	46.97	gold quality
tibial artery	UBERON:0007610	46.91	gold quality
Brodmann (1909) area 9	UBERON:0013540	46.50	gold quality
caudate nucleus	UBERON:0001873	46.00	gold quality
body of stomach	UBERON:0001161	45.99	gold quality
substantia nigra	UBERON:0002038	45.96	gold quality
right lobe of liver	UBERON:0001114	45.74	silver quality
right lung	UBERON:0002167	45.70	gold quality
cortex of kidney	UBERON:0001225	45.57	gold quality
body of pancreas	UBERON:0001150	45.31	silver quality
transverse colon	UBERON:0001157	45.31	gold quality
cerebellar hemisphere	UBERON:0002245	45.19	silver quality
thoracic aorta	UBERON:0001515	45.12	gold quality
minor salivary gland	UBERON:0001830	44.89	gold quality
lower esophagus muscularis layer	UBERON:0035833	44.73	gold quality
ascending aorta	UBERON:0001496	44.57	gold quality
right atrium auricular region	UBERON:0006631	44.55	silver quality
omental fat pad	UBERON:0010414	43.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.82

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.