LINC00566

Summary

LINC00566 (long intergenic non-protein coding RNA 566, HGNC:43710) is a long non-coding RNA gene on chromosome 13q12.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43710
Approved symbol	LINC00566
Name	long intergenic non-protein coding RNA 566
Location	13q12.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261498
Ensembl biotype	lncRNA
Entrez	100861547
RNAcentral	URS00008E39E9 — lncRNA, 583 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000561557

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561557 — 2 exons

Exon	Start	End
ENSE00002630475	24331450	24331536
ENSE00004263317	24336639	24337131

Expression profiles

Bgee: expression breadth ubiquitous, 108 present calls, max score 87.21.

Top tissues by expression

108 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endometrium	UBERON:0001295	87.21	gold quality
endocervix	UBERON:0000458	80.75	gold quality
cortex of kidney	UBERON:0001225	73.61	gold quality
ventricular zone	UBERON:0003053	70.04	gold quality
cortical plate	UBERON:0005343	68.64	gold quality
left uterine tube	UBERON:0001303	65.53	gold quality
metanephros cortex	UBERON:0010533	64.73	gold quality
ganglionic eminence	UBERON:0004023	64.66	gold quality
right uterine tube	UBERON:0001302	64.16	gold quality
kidney	UBERON:0002113	62.71	gold quality
fallopian tube	UBERON:0003889	61.76	gold quality
adult mammalian kidney	UBERON:0000082	60.59	gold quality
primary visual cortex	UBERON:0002436	58.39	gold quality
Brodmann (1909) area 9	UBERON:0013540	58.14	gold quality
prefrontal cortex	UBERON:0000451	57.98	gold quality
placenta	UBERON:0001987	57.77	gold quality
leukocyte	CL:0000738	56.36	silver quality
calcaneal tendon	UBERON:0003701	56.08	gold quality
monocyte	CL:0000576	55.89	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	55.67	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	55.54	gold quality
islet of Langerhans	UBERON:0000006	55.00	gold quality
frontal cortex	UBERON:0001870	54.87	gold quality
cerebral cortex	UBERON:0000956	54.25	gold quality
cerebellar hemisphere	UBERON:0002245	54.12	gold quality
cerebellar cortex	UBERON:0002129	54.07	gold quality
bone marrow	UBERON:0002371	53.39	silver quality
gall bladder	UBERON:0002110	52.95	gold quality
myometrium	UBERON:0001296	52.25	gold quality
brain	UBERON:0000955	51.32	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.