LINC00567

Summary

LINC00567 (long intergenic non-protein coding RNA 567, HGNC:43711) is a long non-coding RNA gene on chromosome 13q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43711
Approved symbol	LINC00567
Name	long intergenic non-protein coding RNA 567
Location	13q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259831
Ensembl biotype	lncRNA
Entrez	283486
RNAcentral	URS0000268887 — lncRNA, 3409 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000569854

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000569854 — 1 exons

Exon	Start	End
ENSE00002584166	110809676	110813084

Expression profiles

Bgee: expression breadth broad, 30 present calls, max score 70.04.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0104 / max 5.9055, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
138268	0.0104	3

Top tissues by expression

157 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	70.04	gold quality
right testis	UBERON:0004534	69.36	gold quality
testis	UBERON:0000473	68.50	gold quality
buccal mucosa cell	CL:0002336	66.96	silver quality
vena cava	UBERON:0004087	62.24	gold quality
saphenous vein	UBERON:0007318	60.05	gold quality
cerebellar hemisphere	UBERON:0002245	60.04	gold quality
pharyngeal mucosa	UBERON:0000355	59.95	gold quality
pericardium	UBERON:0002407	59.82	gold quality
corpus callosum	UBERON:0002336	59.78	gold quality
inferior vagus X ganglion	UBERON:0005363	59.72	gold quality
adrenal cortex	UBERON:0001235	59.69	gold quality
cardiac atrium	UBERON:0002081	59.63	gold quality
omental fat pad	UBERON:0010414	59.63	gold quality
uterine cervix	UBERON:0000002	59.61	gold quality
nipple	UBERON:0002030	59.57	gold quality
spinal cord	UBERON:0002240	59.55	gold quality
peritoneum	UBERON:0002358	59.55	gold quality
layer of synovial tissue	UBERON:0007616	59.53	gold quality
lymph node	UBERON:0000029	59.51	gold quality
dorsal root ganglion	UBERON:0000044	59.49	gold quality
superficial temporal artery	UBERON:0001614	59.39	gold quality
subthalamic nucleus	UBERON:0001906	59.39	gold quality
thymus	UBERON:0002370	59.38	gold quality
trigeminal ganglion	UBERON:0001675	59.36	gold quality
synovial joint	UBERON:0002217	59.34	gold quality
coronary artery	UBERON:0001621	59.30	gold quality
substantia nigra pars reticulata	UBERON:0001966	59.29	gold quality
superior surface of tongue	UBERON:0007371	59.27	gold quality
pons	UBERON:0000988	59.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.