LINC00582

Summary

LINC00582 (long intergenic non-protein coding RNA 582, HGNC:43842) is a long non-coding RNA gene on chromosome 1q42.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43842
Approved symbol	LINC00582
Name	long intergenic non-protein coding RNA 582
Location	1q42.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	SMILO
Ensembl gene	ENSG00000229228
Ensembl biotype	lncRNA
Entrez	100287814
RNAcentral	URS000075D2D1 — lncRNA, 612 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000448058, ENST00000825689

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000448058 — 2 exons

Exon	Start	End
ENSE00004236129	231591292	231591800
ENSE00004236131	231612003	231612241

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 82.31.

Top tissues by expression

226 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	82.31	gold quality
pancreatic ductal cell	CL:0002079	81.71	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.54	gold quality
cardiac muscle of right atrium	UBERON:0003379	69.40	gold quality
left ventricle myocardium	UBERON:0006566	69.12	gold quality
myocardium	UBERON:0002349	67.10	gold quality
ganglionic eminence	UBERON:0004023	66.97	gold quality
tibialis anterior	UBERON:0001385	63.37	silver quality
mucosa of transverse colon	UBERON:0004991	61.61	gold quality
vermiform appendix	UBERON:0001154	59.79	gold quality
spleen	UBERON:0002106	59.53	gold quality
lymph node	UBERON:0000029	58.93	gold quality
rectum	UBERON:0001052	58.68	gold quality
ileal mucosa	UBERON:0000331	57.66	silver quality
deltoid	UBERON:0001476	57.54	gold quality
caecum	UBERON:0001153	57.52	gold quality
epithelial cell of pancreas	CL:0000083	57.28	gold quality
parotid gland	UBERON:0001831	57.25	gold quality
quadriceps femoris	UBERON:0001377	56.96	gold quality
saliva-secreting gland	UBERON:0001044	56.18	gold quality
minor salivary gland	UBERON:0001830	55.97	gold quality
vastus lateralis	UBERON:0001379	55.67	gold quality
gall bladder	UBERON:0002110	55.40	gold quality
nasal cavity epithelium	UBERON:0005384	55.26	gold quality
Brodmann (1909) area 23	UBERON:0013554	55.24	gold quality
muscle tissue	UBERON:0002385	54.92	gold quality
parietal pleura	UBERON:0002400	54.76	gold quality
endothelial cell	CL:0000115	54.43	gold quality
epithelium of nasopharynx	UBERON:0001951	54.39	gold quality
middle temporal gyrus	UBERON:0002771	54.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.