LINC00583

Summary

LINC00583 (long intergenic non-protein coding RNA 583, HGNC:31437) is a long non-coding RNA gene on chromosome 9p23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:31437
Approved symbol	LINC00583
Name	long intergenic non-protein coding RNA 583
Location	9p23
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.250
Ensembl gene	ENSG00000205636
Ensembl biotype	lncRNA
Entrez	100113404
RNAcentral	URS000075B77F — lncRNA, 384 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000381010

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000381010 — 3 exons

Exon	Start	End
ENSE00001487211	13945392	13945610
ENSE00001487212	13944375	13944451
ENSE00001487213	13927971	13928061

Expression profiles

Bgee: expression breadth broad, 50 present calls, max score 92.02.

Top tissues by expression

50 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.02	gold quality
sural nerve	UBERON:0015488	70.75	gold quality
blood	UBERON:0000178	55.58	gold quality
monocyte	CL:0000576	53.95	gold quality
left coronary artery	UBERON:0001626	51.97	gold quality
descending thoracic aorta	UBERON:0002345	51.83	gold quality
gastrocnemius	UBERON:0001388	51.77	gold quality
caudate nucleus	UBERON:0001873	51.43	gold quality
adrenal tissue	UBERON:0018303	49.68	silver quality
lung	UBERON:0002048	49.01	gold quality
heart	UBERON:0000948	48.55	gold quality
tibial artery	UBERON:0007610	48.16	gold quality
right atrium auricular region	UBERON:0006631	47.94	gold quality
Brodmann (1909) area 9	UBERON:0013540	47.94	silver quality
thoracic mammary gland	UBERON:0005200	47.51	gold quality
heart left ventricle	UBERON:0002084	47.02	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.96	gold quality
thoracic aorta	UBERON:0001515	46.51	gold quality
hypothalamus	UBERON:0001898	46.44	gold quality
adrenal gland	UBERON:0002369	46.39	silver quality
ascending aorta	UBERON:0001496	46.17	gold quality
subcutaneous adipose tissue	UBERON:0002190	45.23	gold quality
muscle layer of sigmoid colon	UBERON:0035805	44.82	gold quality
lower esophagus muscularis layer	UBERON:0035833	44.77	gold quality
esophagus mucosa	UBERON:0002469	44.65	gold quality
cerebellar cortex	UBERON:0002129	44.64	silver quality
right frontal lobe	UBERON:0002810	43.71	silver quality
cerebellar hemisphere	UBERON:0002245	43.67	silver quality
omental fat pad	UBERON:0010414	43.66	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	43.61	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.