LINC00596

Summary

LINC00596 (long intergenic non-protein coding RNA 596, HGNC:23167) is a long non-coding RNA gene on chromosome 14q11.2.

Predicted to be located in membrane.

Source: NCBI Gene 102724845 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:23167
Approved symbol	LINC00596
Name	long intergenic non-protein coding RNA 596
Location	14q11.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	CNSLT1I7G
Ensembl gene	ENSG00000259334
Ensembl biotype	lncRNA
Entrez	102724845
RNAcentral	URS000050CB81 — lncRNA, 937 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000559615

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559615 — 3 exons

Exon	Start	End
ENSE00002537352	23922247	23922586
ENSE00002572814	23933747	23933951
ENSE00002575499	23934177	23934568

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 80.74.

Top tissues by expression

91 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.74	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.97	gold quality
skeletal muscle tissue	UBERON:0001134	65.12	gold quality
cortical plate	UBERON:0005343	64.02	gold quality
ganglionic eminence	UBERON:0004023	61.00	gold quality
liver	UBERON:0002107	53.11	silver quality
calcaneal tendon	UBERON:0003701	52.48	silver quality
myometrium	UBERON:0001296	50.78	gold quality
monocyte	CL:0000576	50.73	silver quality
blood	UBERON:0000178	49.96	silver quality
vermiform appendix	UBERON:0001154	48.65	gold quality
adrenal tissue	UBERON:0018303	47.91	silver quality
islet of Langerhans	UBERON:0000006	47.21	gold quality
muscle of leg	UBERON:0001383	46.91	silver quality
right lobe of liver	UBERON:0001114	46.75	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.64	silver quality
right lobe of thyroid gland	UBERON:0001119	46.14	silver quality
kidney	UBERON:0002113	46.13	silver quality
superior frontal gyrus	UBERON:0002661	45.44	silver quality
adult mammalian kidney	UBERON:0000082	45.36	silver quality
prefrontal cortex	UBERON:0000451	45.10	silver quality
body of pancreas	UBERON:0001150	44.63	silver quality
smooth muscle tissue	UBERON:0001135	44.60	gold quality
cerebellar hemisphere	UBERON:0002245	44.32	silver quality
endometrium	UBERON:0001295	44.07	silver quality
gastrocnemius	UBERON:0001388	43.96	silver quality
heart left ventricle	UBERON:0002084	43.87	silver quality
heart	UBERON:0000948	43.45	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	43.19	silver quality
right hemisphere of cerebellum	UBERON:0014890	42.85	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.10

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.