LINC00615

Summary

LINC00615 (long intergenic non-protein coding RNA 615, HGNC:26343) is a long non-coding RNA gene on chromosome 12q21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:26343
Approved symbol	LINC00615
Name	long intergenic non-protein coding RNA 615
Location	12q21.33
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ25378
Ensembl gene	ENSG00000196243
Ensembl biotype	lncRNA
Entrez	439916
RNAcentral	URS0000167C09 — lncRNA, 1406 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000546725

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000546725 — 5 exons

Exon	Start	End
ENSE00002363072	90946424	90946491
ENSE00002365874	90918023	90918050
ENSE00002371774	90938671	90938753
ENSE00003376724	90947655	90948669
ENSE00003380732	90940149	90940360

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 81.47.

Top tissues by expression

111 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.47	gold quality
sural nerve	UBERON:0015488	64.79	silver quality
hindlimb stylopod muscle	UBERON:0004252	58.32	silver quality
ganglionic eminence	UBERON:0004023	57.81	gold quality
skeletal muscle tissue	UBERON:0001134	57.75	gold quality
bone marrow	UBERON:0002371	57.09	gold quality
monocyte	CL:0000576	52.37	silver quality
blood	UBERON:0000178	51.55	silver quality
lymph node	UBERON:0000029	51.52	gold quality
stromal cell of endometrium	CL:0002255	51.37	silver quality
islet of Langerhans	UBERON:0000006	51.18	gold quality
prefrontal cortex	UBERON:0000451	48.59	silver quality
liver	UBERON:0002107	48.48	silver quality
muscle of leg	UBERON:0001383	47.80	silver quality
gall bladder	UBERON:0002110	47.66	gold quality
vermiform appendix	UBERON:0001154	47.44	gold quality
tonsil	UBERON:0002372	46.64	gold quality
placenta	UBERON:0001987	46.55	gold quality
duodenum	UBERON:0002114	46.44	silver quality
gastrocnemius	UBERON:0001388	45.60	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	45.26	silver quality
kidney	UBERON:0002113	45.23	gold quality
frontal cortex	UBERON:0001870	45.18	silver quality
testis	UBERON:0000473	44.12	gold quality
heart left ventricle	UBERON:0002084	44.10	silver quality
cortex of kidney	UBERON:0001225	43.91	silver quality
primary visual cortex	UBERON:0002436	43.80	silver quality
popliteal artery	UBERON:0002250	43.67	silver quality
tibial artery	UBERON:0007610	43.66	silver quality
right testis	UBERON:0004534	43.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.