LINC00622

Summary

LINC00622 (long intergenic non-protein coding RNA 622, HGNC:44251) is a long non-coding RNA gene on chromosome 1p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44251
Approved symbol	LINC00622
Name	long intergenic non-protein coding RNA 622
Location	1p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260941
Ensembl biotype	lncRNA
Entrez	644242
RNAcentral	URS000075AE94 — lncRNA, 1610 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000562811

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562811 — 1 exons

Exon	Start	End
ENSE00002598387	119597702	119599271

Expression profiles

Bgee: expression breadth ubiquitous, 176 present calls, max score 91.82.

Top tissues by expression

243 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endothelial cell	CL:0000115	91.82	gold quality
primary visual cortex	UBERON:0002436	86.24	gold quality
Brodmann (1909) area 23	UBERON:0013554	86.22	gold quality
buccal mucosa cell	CL:0002336	81.97	gold quality
colonic epithelium	UBERON:0000397	78.99	gold quality
occipital lobe	UBERON:0002021	78.92	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.46	gold quality
Brodmann (1909) area 9	UBERON:0013540	78.03	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	77.22	gold quality
middle temporal gyrus	UBERON:0002771	77.07	gold quality
cortical plate	UBERON:0005343	76.40	gold quality
anterior cingulate cortex	UBERON:0009835	76.22	gold quality
prefrontal cortex	UBERON:0000451	75.72	gold quality
omental fat pad	UBERON:0010414	75.52	gold quality
peritoneum	UBERON:0002358	75.43	gold quality
right lung	UBERON:0002167	75.04	gold quality
right frontal lobe	UBERON:0002810	74.90	gold quality
adipose tissue of abdominal region	UBERON:0007808	74.63	gold quality
metanephros cortex	UBERON:0010533	74.49	gold quality
neocortex	UBERON:0001950	74.35	gold quality
visceral pleura	UBERON:0002401	74.19	gold quality
frontal cortex	UBERON:0001870	73.44	gold quality
parietal pleura	UBERON:0002400	73.36	gold quality
cerebellar hemisphere	UBERON:0002245	72.80	gold quality
cerebellar cortex	UBERON:0002129	72.76	gold quality
islet of Langerhans	UBERON:0000006	72.74	gold quality
cerebral cortex	UBERON:0000956	72.49	gold quality
cortex of kidney	UBERON:0001225	72.45	gold quality
adult mammalian kidney	UBERON:0000082	72.36	gold quality
right hemisphere of cerebellum	UBERON:0014890	72.29	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.08

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.