LINC00623

Summary

LINC00623 (long intergenic non-protein coding RNA 623, HGNC:44252) is a long non-coding RNA gene on chromosome 1p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44252
Approved symbol	LINC00623
Name	long intergenic non-protein coding RNA 623
Location	1p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226067
Ensembl biotype	lncRNA
Entrez	728855
RNAcentral	URS000075A782 — lncRNA, 3607 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 149 — 149 lncRNA

ENST00000613486, ENST00000614062, ENST00000615424, ENST00000617702, ENST00000621058, ENST00000649989, ENST00000659101, ENST00000768291, ENST00000768292, ENST00000768293, ENST00000768294, ENST00000768295, ENST00000768296, ENST00000768297, ENST00000768298, ENST00000768299, ENST00000768300, ENST00000768301, ENST00000768302, ENST00000768303, ENST00000768304, ENST00000768305, ENST00000768306, ENST00000768307, ENST00000768308, ENST00000768309, ENST00000768310, ENST00000768311, ENST00000768312, ENST00000768313, ENST00000768314, ENST00000768315, ENST00000768316, ENST00000768317, ENST00000768318, ENST00000768319, ENST00000768320, ENST00000768321, ENST00000768322, ENST00000768323, ENST00000768324, ENST00000768325, ENST00000768326, ENST00000768327, ENST00000768328, ENST00000768329, ENST00000768330, ENST00000768331, ENST00000768332, ENST00000768333, ENST00000768334, ENST00000768335, ENST00000768336, ENST00000768337, ENST00000768338, ENST00000768339, ENST00000768340, ENST00000768341, ENST00000768342, ENST00000768343, ENST00000768344, ENST00000768345, ENST00000768346, ENST00000768347, ENST00000768348, ENST00000768349, ENST00000768350, ENST00000768351, ENST00000768352, ENST00000768353, ENST00000768354, ENST00000768355, ENST00000768356, ENST00000768357, ENST00000768358, ENST00000768359, ENST00000768360, ENST00000768361, ENST00000768362, ENST00000768363, ENST00000768364, ENST00000768365, ENST00000768366, ENST00000768367, ENST00000768368, ENST00000768369, ENST00000768370, ENST00000768371, ENST00000768372, ENST00000768373, ENST00000768374, ENST00000768375, ENST00000769544, ENST00000769545, ENST00000769546, ENST00000769547, ENST00000769548, ENST00000769549, ENST00000769550, ENST00000769551, ENST00000769552, ENST00000769553, ENST00000769554, ENST00000769555, ENST00000769556, ENST00000769557, ENST00000769558, ENST00000769559, ENST00000769560, ENST00000769561, ENST00000769562, ENST00000769563, ENST00000769564, ENST00000769565, ENST00000769566, ENST00000769567, ENST00000769568, ENST00000769569, ENST00000769570, ENST00000769571, ENST00000769572, ENST00000769573, ENST00000769574, ENST00000769575, ENST00000769576, ENST00000769577, ENST00000769578, ENST00000769579, ENST00000769580, ENST00000769581, ENST00000769582, ENST00000769583, ENST00000769584, ENST00000769585, ENST00000769586, ENST00000769587, ENST00000769588, ENST00000769589, ENST00000769590, ENST00000769591, ENST00000769592, ENST00000769593, ENST00000769594, ENST00000769595, ENST00000769596, ENST00000769597, ENST00000769598, ENST00000769599, ENST00000769600

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000613486 — 3 exons

Exon	Start	End
ENSE00003725417	120952439	120952625
ENSE00004130851	120912905	120913450
ENSE00004130854	120953223	120954239

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 94.43.

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
granulocyte	CL:0000094	94.43	gold quality
blood	UBERON:0000178	91.44	gold quality
leukocyte	CL:0000738	90.48	gold quality
monocyte	CL:0000576	90.23	gold quality
lymph node	UBERON:0000029	86.68	gold quality
spleen	UBERON:0002106	85.93	gold quality
right lobe of thyroid gland	UBERON:0001119	85.92	gold quality
bone marrow	UBERON:0002371	85.82	gold quality
left lobe of thyroid gland	UBERON:0001120	85.41	gold quality
hypothalamus	UBERON:0001898	85.27	gold quality
thyroid gland	UBERON:0002046	85.25	gold quality
anterior cingulate cortex	UBERON:0009835	85.16	gold quality
bone marrow cell	CL:0002092	85.14	gold quality
body of pancreas	UBERON:0001150	84.65	gold quality
nucleus accumbens	UBERON:0001882	84.47	gold quality
right coronary artery	UBERON:0001625	84.19	gold quality
prefrontal cortex	UBERON:0000451	84.14	gold quality
superior frontal gyrus	UBERON:0002661	83.73	gold quality
amygdala	UBERON:0001876	83.68	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	83.68	gold quality
temporal lobe	UBERON:0001871	83.51	gold quality
right uterine tube	UBERON:0001302	83.45	gold quality
frontal cortex	UBERON:0001870	83.45	gold quality
descending thoracic aorta	UBERON:0002345	83.42	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	83.33	gold quality
cerebral cortex	UBERON:0000956	83.06	gold quality
mucosa of stomach	UBERON:0001199	83.01	gold quality
pancreas	UBERON:0001264	82.88	gold quality
muscle layer of sigmoid colon	UBERON:0035805	82.88	gold quality
vermiform appendix	UBERON:0001154	82.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.97

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Discriminative and prognostic significance of LINC00623 for lung adenocarcinoma. (PMID:38391164)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.