LINC00644

Summary

LINC00644 (long intergenic non-protein coding RNA 644, HGNC:44297) is a long non-coding RNA gene on chromosome 14q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44297
Approved symbol	LINC00644
Name	long intergenic non-protein coding RNA 644
Location	14q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259142
Ensembl biotype	lncRNA
Entrez	101954204
RNAcentral	URS000075B076 — lncRNA, 303 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000555156, ENST00000835660, ENST00000835661

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000555156 — 2 exons

Exon	Start	End
ENSE00004254405	62133991	62134378
ENSE00004254406	62139909	62140011

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 75.24.

Top tissues by expression

194 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.24	gold quality
monocyte	CL:0000576	65.20	gold quality
adenohypophysis	UBERON:0002196	64.92	gold quality
amygdala	UBERON:0001876	64.21	gold quality
nucleus accumbens	UBERON:0001882	63.42	gold quality
islet of Langerhans	UBERON:0000006	62.33	gold quality
pituitary gland	UBERON:0000007	62.10	gold quality
Brodmann (1909) area 9	UBERON:0013540	62.04	gold quality
anterior cingulate cortex	UBERON:0009835	60.95	gold quality
putamen	UBERON:0001874	60.36	gold quality
caudate nucleus	UBERON:0001873	59.72	gold quality
buccal mucosa cell	CL:0002336	59.66	gold quality
hypothalamus	UBERON:0001898	59.12	gold quality
prefrontal cortex	UBERON:0000451	57.82	gold quality
right frontal lobe	UBERON:0002810	57.78	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	57.24	gold quality
pancreas	UBERON:0001264	56.91	gold quality
left adrenal gland	UBERON:0001234	56.42	gold quality
forebrain	UBERON:0001890	56.29	gold quality
upper lobe of lung	UBERON:0008948	55.79	silver quality
lower lobe of lung	UBERON:0008949	55.68	silver quality
Ammon’s horn	UBERON:0001954	55.43	gold quality
brain	UBERON:0000955	55.31	gold quality
gastrocnemius	UBERON:0001388	54.41	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
neocortex	UBERON:0001950	53.91	gold quality
body of pancreas	UBERON:0001150	53.68	gold quality
cerebral cortex	UBERON:0000956	53.56	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.