LINC00656

Summary

LINC00656 (long intergenic non-protein coding RNA 656, HGNC:27304) is a long non-coding RNA gene on chromosome 20p11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27304
Approved symbol	LINC00656
Name	long intergenic non-protein coding RNA 656
Location	20p11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233746
Ensembl biotype	lncRNA
Entrez	200261
RNAcentral	URS000075E87C — lncRNA, 1926 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000443744, ENST00000652955, ENST00000670261, ENST00000762243, ENST00000762244, ENST00000762245, ENST00000762246, ENST00000762247, ENST00000762248, ENST00000762249, ENST00000762250, ENST00000762251, ENST00000762252

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443744 — 4 exons

Exon	Start	End
ENSE00001678350	23128629	23128729
ENSE00001745776	23128965	23129165
ENSE00004117247	23132499	23132639
ENSE00004117257	23125068	23126538

Expression profiles

Bgee: expression breadth broad, 64 present calls, max score 56.83.

Top tissues by expression

180 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skin of hip	UBERON:0001554	56.83	silver quality
upper leg skin	UBERON:0004262	53.04	silver quality
buccal mucosa cell	CL:0002336	52.54	gold quality
leukocyte	CL:0000738	52.08	silver quality
monocyte	CL:0000576	51.84	silver quality
granulocyte	CL:0000094	50.60	silver quality
blood	UBERON:0000178	49.48	gold quality
anterior cingulate cortex	UBERON:0009835	49.01	gold quality
vermiform appendix	UBERON:0001154	48.99	gold quality
right lobe of liver	UBERON:0001114	48.08	silver quality
muscle of leg	UBERON:0001383	47.68	silver quality
upper lobe of left lung	UBERON:0008952	47.59	gold quality
gastrocnemius	UBERON:0001388	46.77	silver quality
placenta	UBERON:0001987	46.48	gold quality
upper lobe of lung	UBERON:0008948	46.29	gold quality
minor salivary gland	UBERON:0001830	45.88	gold quality
gall bladder	UBERON:0002110	45.84	silver quality
caecum	UBERON:0001153	45.60	gold quality
lymph node	UBERON:0000029	45.31	silver quality
lung	UBERON:0002048	44.83	gold quality
right coronary artery	UBERON:0001625	44.63	gold quality
heart left ventricle	UBERON:0002084	44.41	gold quality
amniotic fluid	UBERON:0000173	44.23	gold quality
lateral globus pallidus	UBERON:0002476	44.17	gold quality
cardiac ventricle	UBERON:0002082	43.99	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
heart	UBERON:0000948	43.19	gold quality
urinary bladder	UBERON:0001255	42.63	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
right lung	UBERON:0002167	42.46	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.