LINC00671

Summary

LINC00671 (long intergenic non-protein coding RNA 671, HGNC:44339) is a long non-coding RNA gene on chromosome 17q21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44339
Approved symbol	LINC00671
Name	long intergenic non-protein coding RNA 671
Location	17q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000213373
Ensembl biotype	lncRNA
Entrez	388387
RNAcentral	URS000075D571 — lncRNA, 1844 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 24 — 24 lncRNA

ENST00000301683, ENST00000417193, ENST00000436546, ENST00000796643, ENST00000796644, ENST00000796645, ENST00000796646, ENST00000796647, ENST00000796648, ENST00000796649, ENST00000796650, ENST00000796651, ENST00000796652, ENST00000796653, ENST00000796654, ENST00000796655, ENST00000796656, ENST00000796657, ENST00000796658, ENST00000796659, ENST00000796660, ENST00000796661, ENST00000796662, ENST00000796663

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000301683 — 6 exons

Exon	Start	End
ENSE00001516360	42877975	42878073
ENSE00001516365	42898633	42898704
ENSE00001690472	42897687	42897918
ENSE00002273429	42894566	42894634
ENSE00004182489	42874664	42874863
ENSE00004182505	42878527	42879818

Expression profiles

Bgee: expression breadth ubiquitous, 143 present calls, max score 89.30.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0518 / max 25.9513, expressed in 8 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
166191	0.0518	8

Top tissues by expression

231 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
body of pancreas	UBERON:0001150	89.30	gold quality
adult mammalian kidney	UBERON:0000082	83.61	gold quality
pancreas	UBERON:0001264	80.81	gold quality
bone marrow cell	CL:0002092	79.72	gold quality
cortex of kidney	UBERON:0001225	79.56	gold quality
kidney	UBERON:0002113	77.60	gold quality
right lobe of liver	UBERON:0001114	76.00	gold quality
metanephros cortex	UBERON:0010533	73.01	gold quality
body of stomach	UBERON:0001161	71.49	gold quality
monocyte	CL:0000576	69.33	gold quality
stomach	UBERON:0000945	68.70	gold quality
blood	UBERON:0000178	66.81	gold quality
ganglionic eminence	UBERON:0004023	66.50	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.69	gold quality
fundus of stomach	UBERON:0001160	65.53	gold quality
cortical plate	UBERON:0005343	65.21	gold quality
metanephros	UBERON:0000081	63.38	gold quality
liver	UBERON:0002107	62.95	gold quality
islet of Langerhans	UBERON:0000006	62.91	gold quality
spleen	UBERON:0002106	62.76	gold quality
right coronary artery	UBERON:0001625	62.05	gold quality
tibial artery	UBERON:0007610	61.69	gold quality
popliteal artery	UBERON:0002250	61.59	gold quality
granulocyte	CL:0000094	60.54	gold quality
cerebellar vermis	UBERON:0004720	60.48	silver quality
subcutaneous adipose tissue	UBERON:0002190	59.72	gold quality
omental fat pad	UBERON:0010414	59.65	gold quality
peritoneum	UBERON:0002358	59.60	gold quality
parotid gland	UBERON:0001831	59.38	gold quality
aorta	UBERON:0000947	58.63	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

Experiment	Marker?	Max mean expression
E-CURD-119	yes	50.96
E-ANND-3	yes	6.90

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• STAT3/LINC00671 axis regulates papillary thyroid tumor growth and metastasis via LDHA-mediated glycolysis. (PMID:34404767)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.