LINC00692

Summary

LINC00692 (long intergenic non-protein coding RNA 692, HGNC:27708) is a long non-coding RNA gene on chromosome 3p24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27708
Approved symbol	LINC00692
Name	long intergenic non-protein coding RNA 692
Location	3p24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230891
Ensembl biotype	lncRNA
Entrez	285326
RNAcentral	URS000075C21D — lncRNA, 930 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000451284, ENST00000496997, ENST00000655652, ENST00000829800

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000451284 — 8 exons

Exon	Start	End
ENSE00001663212	25862988	25863053
ENSE00001687871	25872315	25872482
ENSE00001715655	25870015	25870135
ENSE00001726055	25863285	25863379
ENSE00001765632	25858533	25858798
ENSE00001778968	25871801	25871896
ENSE00001786833	25860691	25860752
ENSE00003879373	25873641	25873748

Expression profiles

Bgee: expression breadth broad, 42 present calls, max score 88.92.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0044 / max 4.0598, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
41509	0.0044	3

Top tissues by expression

166 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	88.92	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.66	gold quality
buccal mucosa cell	CL:0002336	72.58	gold quality
left testis	UBERON:0004533	70.33	gold quality
bone marrow cell	CL:0002092	69.35	silver quality
right testis	UBERON:0004534	68.87	gold quality
testis	UBERON:0000473	68.75	gold quality
sperm	CL:0000019	60.05	silver quality
hindlimb stylopod muscle	UBERON:0004252	59.26	gold quality
upper lobe of lung	UBERON:0008948	56.82	silver quality
monocyte	CL:0000576	50.98	silver quality
muscle of leg	UBERON:0001383	49.45	gold quality
gastrocnemius	UBERON:0001388	47.34	gold quality
islet of Langerhans	UBERON:0000006	46.10	silver quality
pancreas	UBERON:0001264	45.90	silver quality
right frontal lobe	UBERON:0002810	45.64	gold quality
skin of abdomen	UBERON:0001416	45.45	gold quality
anatomical system	UBERON:0000467	44.43	gold quality
tibial nerve	UBERON:0001323	44.16	gold quality
material anatomical entity	UBERON:0000465	44.15	gold quality
multicellular organism	UBERON:0000468	44.12	gold quality
skin of leg	UBERON:0001511	44.09	gold quality
tibial artery	UBERON:0007610	43.73	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
right atrium auricular region	UBERON:0006631	43.13	silver quality
omental fat pad	UBERON:0010414	42.84	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
peritoneum	UBERON:0002358	42.55	silver quality
upper leg skin	UBERON:0004262	42.48	silver quality
cardiac atrium	UBERON:0002081	41.88	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.