LINC00706

Summary

LINC00706 (long intergenic non-protein coding RNA 706, HGNC:44690) is a long non-coding RNA gene on chromosome 10p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44690
Approved symbol	LINC00706
Name	long intergenic non-protein coding RNA 706
Location	10p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000281186
Ensembl biotype	lncRNA
Entrez	100652997
RNAcentral	URS000075ACB0 — lncRNA, 703 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000628989, ENST00000687656, ENST00000830357

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000628989 — 2 exons

Exon	Start	End
ENSE00004244703	6779111	6779201
ENSE00004244705	6774285	6774935

Expression profiles

Bgee: expression breadth broad, 85 present calls, max score 85.89.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1798 / max 43.0608, expressed in 71 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
108166	0.1798	71

Top tissues by expression

85 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.89	silver quality
corpus callosum	UBERON:0002336	68.32	gold quality
substantia nigra	UBERON:0002038	67.74	gold quality
Ammon’s horn	UBERON:0001954	67.25	gold quality
putamen	UBERON:0001874	66.97	gold quality
amygdala	UBERON:0001876	66.37	gold quality
Brodmann (1909) area 9	UBERON:0013540	66.06	gold quality
primary visual cortex	UBERON:0002436	64.77	gold quality
caudate nucleus	UBERON:0001873	64.53	gold quality
prefrontal cortex	UBERON:0000451	63.65	gold quality
hypothalamus	UBERON:0001898	61.66	gold quality
frontal cortex	UBERON:0001870	61.65	gold quality
cerebral cortex	UBERON:0000956	61.38	gold quality
brain	UBERON:0000955	60.95	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	60.61	gold quality
right frontal lobe	UBERON:0002810	59.22	gold quality
cortex of kidney	UBERON:0001225	59.19	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	58.38	gold quality
skeletal muscle tissue	UBERON:0001134	58.09	gold quality
placenta	UBERON:0001987	58.03	gold quality
nucleus accumbens	UBERON:0001882	57.98	gold quality
liver	UBERON:0002107	57.50	gold quality
stromal cell of endometrium	CL:0002255	57.48	gold quality
vermiform appendix	UBERON:0001154	56.40	gold quality
thyroid gland	UBERON:0002046	56.05	silver quality
multicellular organism	UBERON:0000468	55.76	gold quality
anterior cingulate cortex	UBERON:0009835	55.30	gold quality
superior frontal gyrus	UBERON:0002661	54.95	gold quality
ectocervix	UBERON:0012249	54.33	gold quality
kidney	UBERON:0002113	54.13	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.