LINC00710

Summary

LINC00710 (long intergenic non-protein coding RNA 710, HGNC:27386) is a long non-coding RNA gene on chromosome 10p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27386
Approved symbol	LINC00710
Name	long intergenic non-protein coding RNA 710
Location	10p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229240
Ensembl biotype	lncRNA
Entrez	254312
RNAcentral	URS000075D982 — lncRNA, 1127 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 60 — 54 lncRNA, 6 retained_intron

ENST00000428520, ENST00000441855, ENST00000450174, ENST00000596092, ENST00000598573, ENST00000600516, ENST00000601050, ENST00000613357, ENST00000615861, ENST00000617890, ENST00000618245, ENST00000619619, ENST00000622401, ENST00000626553, ENST00000627921, ENST00000628644, ENST00000634224, ENST00000634614, ENST00000635054, ENST00000635670, ENST00000653187, ENST00000653474, ENST00000653692, ENST00000653875, ENST00000654254, ENST00000655018, ENST00000655059, ENST00000655878, ENST00000656110, ENST00000658098, ENST00000658300, ENST00000658432, ENST00000658760, ENST00000659787, ENST00000660131, ENST00000660696, ENST00000661059, ENST00000661323, ENST00000661489, ENST00000661730, ENST00000662261, ENST00000662523, ENST00000663230, ENST00000663943, ENST00000664101, ENST00000665722, ENST00000665878, ENST00000666012, ENST00000666118, ENST00000666257, ENST00000666362, ENST00000666413, ENST00000667647, ENST00000667690, ENST00000667727, ENST00000668056, ENST00000669108, ENST00000670352, ENST00000670712, ENST00000670911

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428520 — 6 exons

Exon	Start	End
ENSE00001595420	10946025	10946094
ENSE00003126239	10934524	10935413
ENSE00003699044	10946512	10946600
ENSE00003700981	10944183	10944324
ENSE00003701773	10947446	10947556
ENSE00003880987	10951938	10952212

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 91.51.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0218 / max 18.9456, expressed in 3 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
108237	0.0080	3
108238	0.0078	3
108239	0.0060	3

Top tissues by expression

225 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	91.51	gold quality
left testis	UBERON:0004533	89.86	gold quality
right testis	UBERON:0004534	89.83	gold quality
testis	UBERON:0000473	86.74	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.79	gold quality
buccal mucosa cell	CL:0002336	73.25	silver quality
adult organism	UBERON:0007023	69.93	gold quality
sural nerve	UBERON:0015488	68.23	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.04	gold quality
colonic epithelium	UBERON:0000397	66.43	silver quality
calcaneal tendon	UBERON:0003701	64.82	gold quality
corpus callosum	UBERON:0002336	60.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.28	gold quality
cortical plate	UBERON:0005343	59.06	gold quality
ganglionic eminence	UBERON:0004023	58.31	gold quality
monocyte	CL:0000576	58.25	gold quality
upper leg skin	UBERON:0004262	54.94	silver quality
tendon	UBERON:0000043	54.88	gold quality
tonsil	UBERON:0002372	54.85	silver quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
germinal epithelium of ovary	UBERON:0001304	53.67	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
epithelial cell of pancreas	CL:0000083	53.26	gold quality
prefrontal cortex	UBERON:0000451	52.69	gold quality
right atrium auricular region	UBERON:0006631	51.98	gold quality
cardiac atrium	UBERON:0002081	51.97	gold quality
tibialis anterior	UBERON:0001385	51.65	silver quality
muscle of leg	UBERON:0001383	51.20	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.