LINC00837

Summary

LINC00837 (long intergenic non-protein coding RNA 837, HGNC:27436) is a long non-coding RNA gene on chromosome 10p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27436
Approved symbol	LINC00837
Name	long intergenic non-protein coding RNA 837
Location	10p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235824
Ensembl biotype	lncRNA
Entrez	100507605
RNAcentral	URS000075BB47 — lncRNA, 4014 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000443246, ENST00000446012, ENST00000608061, ENST00000622423, ENST00000656822, ENST00000657525, ENST00000658979

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443246 — 2 exons

Exon	Start	End
ENSE00001612350	28795773	28796006
ENSE00001765973	28789188	28792944

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 87.31.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0187 / max 22.5542, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
108831	0.0187	3

Top tissues by expression

213 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	87.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.61	gold quality
male germ cell	CL:0000015	84.14	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.14	gold quality
adult organism	UBERON:0007023	83.81	gold quality
right testis	UBERON:0004534	80.10	gold quality
left testis	UBERON:0004533	79.50	gold quality
testis	UBERON:0000473	78.99	gold quality
colonic epithelium	UBERON:0000397	60.75	silver quality
ganglionic eminence	UBERON:0004023	56.94	gold quality
right hemisphere of cerebellum	UBERON:0014890	52.40	gold quality
stromal cell of endometrium	CL:0002255	52.39	silver quality
cerebellar cortex	UBERON:0002129	51.98	gold quality
cerebellar hemisphere	UBERON:0002245	51.98	gold quality
leukocyte	CL:0000738	51.88	silver quality
monocyte	CL:0000576	51.63	gold quality
mononuclear cell	CL:0000842	51.59	silver quality
cerebellum	UBERON:0002037	51.15	gold quality
islet of Langerhans	UBERON:0000006	50.76	gold quality
bone marrow cell	CL:0002092	49.58	gold quality
Brodmann (1909) area 46	UBERON:0006483	49.30	gold quality
cervix squamous epithelium	UBERON:0006922	49.20	gold quality
hair follicle	UBERON:0002073	49.18	gold quality
quadriceps femoris	UBERON:0001377	49.03	gold quality
olfactory bulb	UBERON:0002264	48.92	gold quality
thymus	UBERON:0002370	48.90	gold quality
myocardium	UBERON:0002349	48.87	gold quality
type B pancreatic cell	CL:0000169	48.83	gold quality
epithelial cell of pancreas	CL:0000083	48.69	gold quality
vastus lateralis	UBERON:0001379	48.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.59

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Identification of two novel lipid metabolism-related long non-coding RNAs (SNHG17 and LINC00837) as potential signatures for osteosarcoma prognosis and precise treatment. (PMID:37231440)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.