LINC00867

Summary

LINC00867 (long intergenic non-protein coding RNA 867, HGNC:45265) is a long non-coding RNA gene on chromosome 10q26.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:45265
Approved symbol	LINC00867
Name	long intergenic non-protein coding RNA 867
Location	10q26.11
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232139
Ensembl biotype	lncRNA
Entrez	100506126
RNAcentral	URS000075EE20 — lncRNA, 585 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 23 — 23 lncRNA

ENST00000411666, ENST00000415417, ENST00000445161, ENST00000453236, ENST00000657224, ENST00000664512, ENST00000668223, ENST00000670629, ENST00000763213, ENST00000763214, ENST00000763215, ENST00000763216, ENST00000763217, ENST00000763218, ENST00000763219, ENST00000763220, ENST00000763221, ENST00000763222, ENST00000763223, ENST00000763224, ENST00000763225, ENST00000763226, ENST00000763227

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411666 — 4 exons

Exon	Start	End
ENSE00001686734	118358997	118359203
ENSE00001691491	118357527	118357578
ENSE00001756190	118357772	118357848
ENSE00003873946	118357010	118357158

Expression profiles

Bgee: expression breadth ubiquitous, 150 present calls, max score 80.62.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1049 / max 66.9679, expressed in 8 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
107289	0.0559	8
107291	0.0401	5
107290	0.0089	3

Top tissues by expression

234 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus epididymis	UBERON:0004359	80.62	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.34	gold quality
bone marrow cell	CL:0002092	70.40	silver quality
penis	UBERON:0000989	69.27	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.43	gold quality
ventricular zone	UBERON:0003053	65.44	gold quality
sural nerve	UBERON:0015488	61.89	silver quality
buccal mucosa cell	CL:0002336	60.41	gold quality
cauda epididymis	UBERON:0004360	60.16	silver quality
ganglionic eminence	UBERON:0004023	60.09	gold quality
right testis	UBERON:0004534	58.67	gold quality
left testis	UBERON:0004533	57.53	gold quality
monocyte	CL:0000576	56.85	gold quality
testis	UBERON:0000473	56.62	gold quality
adrenal tissue	UBERON:0018303	56.29	gold quality
caput epididymis	UBERON:0004358	56.25	gold quality
prefrontal cortex	UBERON:0000451	55.96	gold quality
calcaneal tendon	UBERON:0003701	54.81	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.74	gold quality
islet of Langerhans	UBERON:0000006	51.92	gold quality
nucleus accumbens	UBERON:0001882	51.36	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.16	gold quality
right uterine tube	UBERON:0001302	51.11	gold quality
anterior cingulate cortex	UBERON:0009835	50.82	gold quality
muscle of leg	UBERON:0001383	50.31	gold quality
right coronary artery	UBERON:0001625	50.14	gold quality
putamen	UBERON:0001874	49.76	gold quality
small intestine	UBERON:0002108	49.71	gold quality
small intestine Peyer’s patch	UBERON:0003454	49.68	gold quality
tendon	UBERON:0000043	49.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.