LINC00881

Summary

LINC00881 (long intergenic non-protein coding RNA 881, HGNC:48567) is a long non-coding RNA gene on chromosome 3q25.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48567
Approved symbol	LINC00881
Name	long intergenic non-protein coding RNA 881
Location	3q25.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	LIPTER
Ensembl gene	ENSG00000241135
Ensembl biotype	lncRNA
Entrez	100498859
RNAcentral	URS0000469D72 — lncRNA, 791 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 80 — 79 lncRNA, 1 retained_intron

ENST00000460796, ENST00000467995, ENST00000471719, ENST00000474477, ENST00000475102, ENST00000480817, ENST00000487238, ENST00000488040, ENST00000494885, ENST00000654705, ENST00000654819, ENST00000654835, ENST00000660852, ENST00000663887, ENST00000665438, ENST00000665841, ENST00000666301, ENST00000667900, ENST00000668714, ENST00000670208, ENST00000691958, ENST00000701678, ENST00000781642, ENST00000781643, ENST00000781644, ENST00000781645, ENST00000781646, ENST00000781647, ENST00000781648, ENST00000781649, ENST00000781650, ENST00000781651, ENST00000781652, ENST00000781653, ENST00000781654, ENST00000781655, ENST00000781656, ENST00000781657, ENST00000781658, ENST00000781659, ENST00000781660, ENST00000781661, ENST00000781662, ENST00000781663, ENST00000781664, ENST00000781665, ENST00000781666, ENST00000781667, ENST00000781668, ENST00000781669, ENST00000781670, ENST00000781671, ENST00000781672, ENST00000781673, ENST00000781674, ENST00000781675, ENST00000781676, ENST00000781677, ENST00000781678, ENST00000781679, ENST00000781680, ENST00000781925, ENST00000781926, ENST00000781927, ENST00000781928, ENST00000781929, ENST00000781930, ENST00000781931, ENST00000781932, ENST00000781933, ENST00000781934, ENST00000781935, ENST00000781936, ENST00000781937, ENST00000781938, ENST00000781939, ENST00000781940, ENST00000781941, ENST00000781942, ENST00000781943

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000460796 — 2 exons

Exon	Start	End
ENSE00004153926	157239590	157241723
ENSE00004154469	157175223	157175389

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 96.78.

FANTOM5 (CAGE): breadth broad, TPM avg 1.3444 / max 481.9799, expressed in 225 samples.

FANTOM5 promoters (8 alternative TSS)

Promoter ID	TPM avg	Samples expressed
39450	0.4149	28
39454	0.2026	77
39448	0.2009	79
39451	0.1732	23
39455	0.1663	63
39452	0.0945	23
39453	0.0601	24
39449	0.0318	9

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left ventricle myocardium	UBERON:0006566	96.78	gold quality
heart right ventricle	UBERON:0002080	96.37	gold quality
heart left ventricle	UBERON:0002084	95.85	gold quality
myocardium	UBERON:0002349	95.82	gold quality
cardiac ventricle	UBERON:0002082	95.80	gold quality
right atrium auricular region	UBERON:0006631	95.59	gold quality
cardiac atrium	UBERON:0002081	95.45	gold quality
cardiac muscle of right atrium	UBERON:0003379	94.33	gold quality
apex of heart	UBERON:0002098	93.41	gold quality
heart	UBERON:0000948	91.83	gold quality
upper arm skin	UBERON:0004263	82.00	gold quality
buccal mucosa cell	CL:0002336	78.09	gold quality
sperm	CL:0000019	73.69	gold quality
epithelial cell of pancreas	CL:0000083	72.60	gold quality
vena cava	UBERON:0004087	69.71	gold quality
bone marrow cell	CL:0002092	68.16	silver quality
ganglionic eminence	UBERON:0004023	67.25	gold quality
cerebellar vermis	UBERON:0004720	66.60	gold quality
colonic epithelium	UBERON:0000397	64.88	silver quality
adenohypophysis	UBERON:0002196	64.69	gold quality
kidney epithelium	UBERON:0004819	64.55	gold quality
corpus callosum	UBERON:0002336	64.42	gold quality
oocyte	CL:0000023	63.92	gold quality
right coronary artery	UBERON:0001625	63.15	gold quality
muscle tissue	UBERON:0002385	63.10	gold quality
right lobe of thyroid gland	UBERON:0001119	62.70	gold quality
pituitary gland	UBERON:0000007	62.64	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.63	gold quality
right ovary	UBERON:0002118	62.22	gold quality
left lobe of thyroid gland	UBERON:0001120	62.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.37

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Lipid droplet-associated lncRNA LIPTER preserves cardiac lipid metabolism. (PMID:37264180)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.