LINC00895

Summary

LINC00895 (long intergenic non-protein coding RNA 895, HGNC:48580) is a long non-coding RNA gene on chromosome 22q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48580
Approved symbol	LINC00895
Name	long intergenic non-protein coding RNA 895
Location	22q11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000281548
Ensembl biotype	lncRNA
Entrez	150185
RNAcentral	URS000075CCA2 — lncRNA, 710 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000629028, ENST00000811931

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000629028 — 1 exons

Exon	Start	End
ENSE00003774049	19565203	19566839

Expression profiles

Bgee: expression breadth broad, 65 present calls, max score 63.78.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0185 / max 16.2391, expressed in 8 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
193160	0.0185	8

Top tissues by expression

65 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	63.78	silver quality
ventricular zone	UBERON:0003053	61.27	gold quality
right testis	UBERON:0004534	58.90	gold quality
testis	UBERON:0000473	58.84	gold quality
left testis	UBERON:0004533	58.31	gold quality
skeletal muscle tissue	UBERON:0001134	52.08	silver quality
blood	UBERON:0000178	50.37	silver quality
monocyte	CL:0000576	49.71	silver quality
multicellular organism	UBERON:0000468	49.25	gold quality
islet of Langerhans	UBERON:0000006	48.80	silver quality
prefrontal cortex	UBERON:0000451	48.73	silver quality
ovary	UBERON:0000992	46.75	silver quality
right lobe of liver	UBERON:0001114	46.37	silver quality
duodenum	UBERON:0002114	46.28	silver quality
placenta	UBERON:0001987	46.11	gold quality
myometrium	UBERON:0001296	46.00	silver quality
muscle of leg	UBERON:0001383	45.94	silver quality
heart	UBERON:0000948	45.92	silver quality
gastrocnemius	UBERON:0001388	45.60	silver quality
heart left ventricle	UBERON:0002084	45.10	silver quality
gall bladder	UBERON:0002110	44.78	gold quality
tibial nerve	UBERON:0001323	44.71	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	43.02	gold quality
corpus callosum	UBERON:0002336	42.89	silver quality
left ovary	UBERON:0002119	42.80	silver quality
small intestine	UBERON:0002108	42.72	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	42.23	silver quality
adipose tissue	UBERON:0001013	41.98	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	41.82	gold quality
popliteal artery	UBERON:0002250	41.72	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.10

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.