LINC00907

Summary

LINC00907 (long intergenic non-protein coding RNA 907, HGNC:44327) is a long non-coding RNA gene on chromosome 18q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44327
Approved symbol	LINC00907
Name	long intergenic non-protein coding RNA 907
Location	18q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267586
Ensembl biotype	lncRNA
Entrez	284260
RNAcentral	URS000075B00D — lncRNA, 1865 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 36 — 36 lncRNA

ENST00000585627, ENST00000585639, ENST00000586447, ENST00000586990, ENST00000589068, ENST00000591199, ENST00000591381, ENST00000593051, ENST00000593234, ENST00000593316, ENST00000601948, ENST00000658915, ENST00000659948, ENST00000753323, ENST00000753324, ENST00000753325, ENST00000753326, ENST00000753327, ENST00000753328, ENST00000753329, ENST00000753330, ENST00000753331, ENST00000753332, ENST00000753333, ENST00000753334, ENST00000753335, ENST00000753336, ENST00000753337, ENST00000753338, ENST00000753339, ENST00000753340, ENST00000753341, ENST00000753342, ENST00000753343, ENST00000753344, ENST00000753345

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000585627 — 5 exons

Exon	Start	End
ENSE00002779070	42516119	42518953
ENSE00002845633	42453932	42454098
ENSE00002916461	42454907	42454989
ENSE00002926542	42225964	42226107
ENSE00002931023	42186668	42186762

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 80.60.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.2049 / max 1683.2588, expressed in 54 samples.

FANTOM5 promoters (12 alternative TSS)

Promoter ID	TPM avg	Samples expressed
170020	0.8058	8
170015	0.1368	24
170063	0.0609	15
170013	0.0495	3
170016	0.0376	7
170014	0.0339	13
170019	0.0270	3
170012	0.0238	2
170010	0.0177	2
170018	0.0050	1

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.60	gold quality
right lobe of liver	UBERON:0001114	76.17	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.73	gold quality
sural nerve	UBERON:0015488	71.87	gold quality
cortical plate	UBERON:0005343	67.37	gold quality
ventricular zone	UBERON:0003053	65.56	gold quality
liver	UBERON:0002107	64.80	gold quality
ganglionic eminence	UBERON:0004023	64.12	gold quality
tendon of biceps brachii	UBERON:0008188	62.95	silver quality
islet of Langerhans	UBERON:0000006	60.64	gold quality
cerebellar cortex	UBERON:0002129	58.87	gold quality
cerebellar hemisphere	UBERON:0002245	58.86	gold quality
stromal cell of endometrium	CL:0002255	58.47	gold quality
monocyte	CL:0000576	58.39	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.07	gold quality
cerebellum	UBERON:0002037	57.58	gold quality
right hemisphere of cerebellum	UBERON:0014890	57.50	gold quality
calcaneal tendon	UBERON:0003701	56.85	gold quality
vermiform appendix	UBERON:0001154	56.83	gold quality
lower esophagus mucosa	UBERON:0035834	56.71	gold quality
pancreas	UBERON:0001264	55.89	gold quality
cortex of kidney	UBERON:0001225	55.84	gold quality
adult mammalian kidney	UBERON:0000082	55.81	gold quality
adrenal tissue	UBERON:0018303	55.57	gold quality
tibial nerve	UBERON:0001323	55.17	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	55.13	gold quality
corpus callosum	UBERON:0002336	55.05	gold quality
left adrenal gland	UBERON:0001234	53.78	gold quality
spinal cord	UBERON:0002240	53.75	gold quality
body of pancreas	UBERON:0001150	53.63	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	7.26

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• lincRNA00907 promotes NASH progression by targeting miRNA-942-5p/TAOK1. (PMID:38613803)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.