LINC00910

Summary

LINC00910 (long intergenic non-protein coding RNA 910, HGNC:44361) is a long non-coding RNA gene on chromosome 17q21.31.

Predicted to enable pre-mRNA branch point binding activity. Predicted to be involved in mRNA branch site recognition. Predicted to be part of U2 snRNP.

Source: NCBI Gene 100130581 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44361
Approved symbol	LINC00910
Name	long intergenic non-protein coding RNA 910
Location	17q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000188825
Ensembl biotype	lncRNA
Entrez	100130581
RNAcentral	URS000075DFE4 — lncRNA, 2688 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 73 — 73 lncRNA

ENST00000341011, ENST00000586231, ENST00000587874, ENST00000588654, ENST00000592094, ENST00000592135, ENST00000656132, ENST00000656704, ENST00000658096, ENST00000658202, ENST00000658683, ENST00000658754, ENST00000661340, ENST00000662582, ENST00000662750, ENST00000662853, ENST00000663186, ENST00000664287, ENST00000664824, ENST00000665553, ENST00000666319, ENST00000667855, ENST00000686570, ENST00000686936, ENST00000692543, ENST00000701258, ENST00000701983, ENST00000717193, ENST00000717194, ENST00000717195, ENST00000717196, ENST00000717197, ENST00000828855, ENST00000828856, ENST00000828857, ENST00000828858, ENST00000828859, ENST00000828860, ENST00000828861, ENST00000828862, ENST00000828863, ENST00000828864, ENST00000828865, ENST00000828866, ENST00000828867, ENST00000828868, ENST00000828869, ENST00000828870, ENST00000828871, ENST00000828872, ENST00000828873, ENST00000828874, ENST00000828875, ENST00000828876, ENST00000828877, ENST00000828878, ENST00000828879, ENST00000828880, ENST00000828881, ENST00000828882, ENST00000828883, ENST00000828884, ENST00000828885, ENST00000828886, ENST00000828887, ENST00000828888, ENST00000828889, ENST00000828890, ENST00000828891, ENST00000828892, ENST00000828893, ENST00000828894, ENST00000828895

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000341011 — 6 exons

Exon	Start	End
ENSE00001373974	43377671	43377813
ENSE00001379339	43381273	43381660
ENSE00001473188	43388289	43388545
ENSE00001798821	43371247	43371426
ENSE00002267944	43369845	43371039
ENSE00003261109	43379123	43379262

Expression profiles

Bgee: expression breadth ubiquitous, 164 present calls, max score 85.72.

FANTOM5 (CAGE): breadth broad, TPM avg 0.7874 / max 22.1598, expressed in 373 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter ID	TPM avg	Samples expressed
166236	0.3989	161
166231	0.3433	158
166235	0.0194	6
166234	0.0187	2
166233	0.0050	1
166232	0.0020	0

Top tissues by expression

243 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	85.72	gold quality
sural nerve	UBERON:0015488	85.25	gold quality
buccal mucosa cell	CL:0002336	85.23	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.16	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.87	gold quality
hindlimb stylopod muscle	UBERON:0004252	79.78	gold quality
left ovary	UBERON:0002119	78.05	gold quality
body of pancreas	UBERON:0001150	77.16	gold quality
colonic epithelium	UBERON:0000397	76.80	gold quality
gastrocnemius	UBERON:0001388	76.49	gold quality
right lobe of liver	UBERON:0001114	76.39	gold quality
granulocyte	CL:0000094	76.33	gold quality
right adrenal gland cortex	UBERON:0035827	76.22	gold quality
muscle of leg	UBERON:0001383	76.20	gold quality
ectocervix	UBERON:0012249	76.13	gold quality
mucosa of stomach	UBERON:0001199	76.10	gold quality
spleen	UBERON:0002106	76.06	gold quality
right ovary	UBERON:0002118	75.98	gold quality
muscle layer of sigmoid colon	UBERON:0035805	75.70	gold quality
right adrenal gland	UBERON:0001233	75.27	gold quality
body of uterus	UBERON:0009853	75.26	gold quality
body of stomach	UBERON:0001161	75.15	gold quality
left adrenal gland cortex	UBERON:0035825	75.10	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	75.00	gold quality
left uterine tube	UBERON:0001303	74.97	gold quality
calcaneal tendon	UBERON:0003701	74.84	gold quality
bone marrow cell	CL:0002092	74.76	silver quality
right lobe of thyroid gland	UBERON:0001119	74.69	gold quality
tibial nerve	UBERON:0001323	74.65	gold quality
lower esophagus muscularis layer	UBERON:0035833	74.51	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.