LINC00911

Summary

LINC00911 (long intergenic non-protein coding RNA 911, HGNC:48596) is a long non-coding RNA gene on chromosome 14q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48596
Approved symbol	LINC00911
Name	long intergenic non-protein coding RNA 911
Location	14q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259107
Ensembl biotype	lncRNA
Entrez	100996280
RNAcentral	URS000075D1C9 — lncRNA, 560 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000555272, ENST00000557155, ENST00000656206, ENST00000662110, ENST00000667555, ENST00000668320

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000555272 — 2 exons

Exon	Start	End
ENSE00002489461	85419684	85420054
ENSE00003869913	85407901	85408036

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 91.29.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0398 / max 8.0066, expressed in 22 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
140896	0.0398	22

Top tissues by expression

207 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.29	gold quality
buccal mucosa cell	CL:0002336	81.03	gold quality
sperm	CL:0000019	73.80	silver quality
bone marrow cell	CL:0002092	70.91	silver quality
right testis	UBERON:0004534	70.66	gold quality
left testis	UBERON:0004533	68.01	gold quality
testis	UBERON:0000473	67.85	gold quality
tibialis anterior	UBERON:0001385	66.51	silver quality
ileal mucosa	UBERON:0000331	62.82	silver quality
deltoid	UBERON:0001476	59.35	gold quality
tibial nerve	UBERON:0001323	58.59	gold quality
pancreatic ductal cell	CL:0002079	57.66	silver quality
muscle of leg	UBERON:0001383	57.56	gold quality
monocyte	CL:0000576	56.92	gold quality
gastrocnemius	UBERON:0001388	56.67	gold quality
islet of Langerhans	UBERON:0000006	54.49	gold quality
epithelial cell of pancreas	CL:0000083	54.37	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
prefrontal cortex	UBERON:0000451	53.76	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
myocardium	UBERON:0002349	50.25	gold quality
left ovary	UBERON:0002119	49.50	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.40	gold quality
left coronary artery	UBERON:0001626	48.59	gold quality
tibial artery	UBERON:0007610	48.51	gold quality
right lobe of thyroid gland	UBERON:0001119	48.40	gold quality
Brodmann (1909) area 9	UBERON:0013540	47.96	gold quality
nasal cavity epithelium	UBERON:0005384	47.92	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-HCAD-30	no	20.46
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.