LINC00919

Summary

LINC00919 (long intergenic non-protein coding RNA 919, HGNC:48610) is a long non-coding RNA gene on chromosome 16q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48610
Approved symbol	LINC00919
Name	long intergenic non-protein coding RNA 919
Location	16q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260268
Ensembl biotype	lncRNA
Entrez	100505619
RNAcentral	URS0000244E99 — lncRNA, 1658 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 39 — 37 lncRNA, 2 retained_intron

ENST00000561513, ENST00000564911, ENST00000564986, ENST00000565742, ENST00000566314, ENST00000566628, ENST00000568524, ENST00000622950, ENST00000655537, ENST00000715946, ENST00000816924, ENST00000816925, ENST00000816926, ENST00000816927, ENST00000816928, ENST00000816929, ENST00000816930, ENST00000816931, ENST00000816932, ENST00000816933, ENST00000816934, ENST00000816935, ENST00000816936, ENST00000816937, ENST00000816938, ENST00000816939, ENST00000816940, ENST00000816941, ENST00000816942, ENST00000816943, ENST00000816944, ENST00000816945, ENST00000816946, ENST00000816947, ENST00000816948, ENST00000816949, ENST00000816950, ENST00000816951, ENST00000816952

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561513 — 3 exons

Exon	Start	End
ENSE00002614350	52084713	52084824
ENSE00004028422	52085066	52085172
ENSE00004220236	52083065	52084566

Expression profiles

Bgee: expression breadth broad, 48 present calls, max score 97.81.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1211 / max 141.0876, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
157373	0.1211	3

Top tissues by expression

178 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	97.81	gold quality
right testis	UBERON:0004534	92.71	gold quality
left testis	UBERON:0004533	92.63	gold quality
testis	UBERON:0000473	89.99	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.06	gold quality
adult organism	UBERON:0007023	84.53	gold quality
tibial nerve	UBERON:0001323	75.10	gold quality
cardiac muscle of right atrium	UBERON:0003379	74.95	gold quality
left ventricle myocardium	UBERON:0006566	74.70	gold quality
buccal mucosa cell	CL:0002336	68.44	silver quality
pancreatic ductal cell	CL:0002079	63.89	silver quality
tibialis anterior	UBERON:0001385	63.39	silver quality
myocardium	UBERON:0002349	61.21	gold quality
epithelial cell of pancreas	CL:0000083	55.12	gold quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
endothelial cell	CL:0000115	53.35	gold quality
deltoid	UBERON:0001476	53.18	gold quality
upper leg skin	UBERON:0004262	52.81	silver quality
ileal mucosa	UBERON:0000331	52.47	silver quality
nasal cavity epithelium	UBERON:0005384	52.07	gold quality
quadriceps femoris	UBERON:0001377	51.23	gold quality
gastrocnemius	UBERON:0001388	50.59	gold quality
vastus lateralis	UBERON:0001379	50.35	gold quality
hindlimb stylopod muscle	UBERON:0004252	50.29	gold quality
Brodmann (1909) area 46	UBERON:0006483	50.21	gold quality
right frontal lobe	UBERON:0002810	49.07	gold quality
left lobe of thyroid gland	UBERON:0001120	48.85	gold quality
anatomical system	UBERON:0000467	47.88	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.