LINC00923

Summary

LINC00923 (long intergenic non-protein coding RNA 923, HGNC:28088) is a long non-coding RNA gene on chromosome 15q26.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:28088
Approved symbol	LINC00923
Name	long intergenic non-protein coding RNA 923
Location	15q26.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251209
Ensembl biotype	lncRNA
Entrez	91948
RNAcentral	URS0000759C39 — lncRNA, 1517 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 102 — 102 lncRNA

ENST00000503768, ENST00000503874, ENST00000558179, ENST00000558621, ENST00000614972, ENST00000615399, ENST00000618064, ENST00000619015, ENST00000621777, ENST00000647870, ENST00000653612, ENST00000653998, ENST00000655088, ENST00000655922, ENST00000656917, ENST00000657749, ENST00000658023, ENST00000658159, ENST00000658446, ENST00000658901, ENST00000662202, ENST00000664000, ENST00000664109, ENST00000664171, ENST00000666698, ENST00000668613, ENST00000669932, ENST00000670719, ENST00000671187, ENST00000671366, ENST00000701095, ENST00000715390, ENST00000715391, ENST00000715392, ENST00000715695, ENST00000740435, ENST00000740436, ENST00000740437, ENST00000740438, ENST00000740439, ENST00000740440, ENST00000740441, ENST00000740442, ENST00000740443, ENST00000740444, ENST00000740445, ENST00000740446, ENST00000740447, ENST00000740448, ENST00000740449, ENST00000740450, ENST00000740451, ENST00000740452, ENST00000740453, ENST00000740454, ENST00000740455, ENST00000740456, ENST00000740457, ENST00000740458, ENST00000740459, ENST00000740460, ENST00000740461, ENST00000740462, ENST00000740463, ENST00000740464, ENST00000740465, ENST00000740466, ENST00000740467, ENST00000740468, ENST00000740469, ENST00000740470, ENST00000740471, ENST00000740472, ENST00000740473, ENST00000740474, ENST00000740475, ENST00000740476, ENST00000740477, ENST00000740478, ENST00000740479, ENST00000740480, ENST00000740481, ENST00000740482, ENST00000740483, ENST00000740484, ENST00000740485, ENST00000740486, ENST00000740487, ENST00000740488, ENST00000740489, ENST00000740490, ENST00000740491, ENST00000740492, ENST00000740493, ENST00000740494, ENST00000740495, ENST00000740496, ENST00000740497, ENST00000740498, ENST00000740499, ENST00000740501, ENST00000740502

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503768 — 3 exons

Exon	Start	End
ENSE00002036830	97758490	97758661
ENSE00002058285	97742218	97743483
ENSE00002085367	97873953	97874550

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 86.06.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1948 / max 12.3102, expressed in 96 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
151720	0.1948	96

Top tissues by expression

245 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.06	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.45	gold quality
lower esophagus muscularis layer	UBERON:0035833	78.72	gold quality
lower esophagus	UBERON:0013473	78.63	gold quality
colonic epithelium	UBERON:0000397	77.74	gold quality
sural nerve	UBERON:0015488	76.57	gold quality
apex of heart	UBERON:0002098	74.40	gold quality
adrenal tissue	UBERON:0018303	74.03	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	72.93	gold quality
right adrenal gland cortex	UBERON:0035827	72.56	gold quality
muscle layer of sigmoid colon	UBERON:0035805	71.59	gold quality
body of pancreas	UBERON:0001150	70.83	gold quality
left adrenal gland	UBERON:0001234	70.65	gold quality
bone marrow cell	CL:0002092	70.61	gold quality
right adrenal gland	UBERON:0001233	70.55	gold quality
left adrenal gland cortex	UBERON:0035825	70.42	gold quality
adenohypophysis	UBERON:0002196	69.37	gold quality
transverse colon	UBERON:0001157	69.32	gold quality
adrenal gland	UBERON:0002369	69.02	gold quality
left testis	UBERON:0004533	68.88	gold quality
adrenal cortex	UBERON:0001235	68.74	gold quality
mucosa of stomach	UBERON:0001199	68.51	gold quality
testis	UBERON:0000473	68.14	gold quality
mucosa of transverse colon	UBERON:0004991	68.12	gold quality
right testis	UBERON:0004534	67.84	gold quality
heart left ventricle	UBERON:0002084	67.65	gold quality
rectum	UBERON:0001052	67.49	gold quality
left lobe of thyroid gland	UBERON:0001120	67.37	gold quality
smooth muscle tissue	UBERON:0001135	67.31	gold quality
body of uterus	UBERON:0009853	67.26	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.