LINC00928

Summary

LINC00928 (long intergenic non-protein coding RNA 928, HGNC:27535) is a long non-coding RNA gene on chromosome 15q26.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27535
Approved symbol	LINC00928
Name	long intergenic non-protein coding RNA 928
Location	15q26.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259218
Ensembl biotype	lncRNA
Entrez	283761
RNAcentral	URS000075DF48 — lncRNA, 2366 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000559227, ENST00000559967, ENST00000561108, ENST00000561201, ENST00000660770, ENST00000661183

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559227 — 3 exons

Exon	Start	End
ENSE00002555485	89514588	89514833
ENSE00002565650	89517284	89517437
ENSE00002575005	89523581	89524016

Expression profiles

Bgee: expression breadth broad, 76 present calls, max score 88.37.

Top tissues by expression

192 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	88.37	gold quality
ganglionic eminence	UBERON:0004023	82.74	gold quality
cortical plate	UBERON:0005343	76.07	gold quality
sperm	CL:0000019	69.05	silver quality
right testis	UBERON:0004534	58.27	gold quality
left ovary	UBERON:0002119	57.36	gold quality
lower esophagus mucosa	UBERON:0035834	56.02	gold quality
left testis	UBERON:0004533	55.44	gold quality
esophagus mucosa	UBERON:0002469	55.12	gold quality
monocyte	CL:0000576	55.00	gold quality
prefrontal cortex	UBERON:0000451	54.42	gold quality
minor salivary gland	UBERON:0001830	54.17	gold quality
esophagus	UBERON:0001043	53.98	gold quality
testis	UBERON:0000473	53.92	gold quality
putamen	UBERON:0001874	53.89	gold quality
ectocervix	UBERON:0012249	53.77	gold quality
nucleus accumbens	UBERON:0001882	53.57	gold quality
lower esophagus muscularis layer	UBERON:0035833	52.76	gold quality
lower esophagus	UBERON:0013473	52.75	gold quality
Brodmann (1909) area 9	UBERON:0013540	52.66	gold quality
endothelial cell	CL:0000115	52.53	gold quality
corpus callosum	UBERON:0002336	52.22	gold quality
caudate nucleus	UBERON:0001873	51.95	gold quality
right lobe of liver	UBERON:0001114	51.86	gold quality
anterior cingulate cortex	UBERON:0009835	51.66	gold quality
upper leg skin	UBERON:0004262	51.48	silver quality
neocortex	UBERON:0001950	51.15	gold quality
amygdala	UBERON:0001876	51.04	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	50.84	gold quality
right frontal lobe	UBERON:0002810	50.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.