LINC00967

Summary

LINC00967 (long intergenic non-protein coding RNA 967, HGNC:48725) is a long non-coding RNA gene on chromosome 8q13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48725
Approved symbol	LINC00967
Name	long intergenic non-protein coding RNA 967
Location	8q13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253138
Ensembl biotype	lncRNA
Entrez	100505659
RNAcentral	URS000075D991 — lncRNA, 1503 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 53 — 53 lncRNA

ENST00000517689, ENST00000517725, ENST00000518035, ENST00000518412, ENST00000729586, ENST00000729587, ENST00000729588, ENST00000729589, ENST00000729590, ENST00000729591, ENST00000729592, ENST00000729593, ENST00000729594, ENST00000729595, ENST00000729596, ENST00000729597, ENST00000729598, ENST00000729599, ENST00000729600, ENST00000729601, ENST00000729602, ENST00000729603, ENST00000729604, ENST00000729605, ENST00000729606, ENST00000729607, ENST00000729608, ENST00000729609, ENST00000729610, ENST00000729611, ENST00000729612, ENST00000729613, ENST00000729614, ENST00000729615, ENST00000729616, ENST00000729617, ENST00000729618, ENST00000729619, ENST00000729620, ENST00000729621, ENST00000729622, ENST00000729623, ENST00000729624, ENST00000729625, ENST00000729626, ENST00000729627, ENST00000729628, ENST00000729629, ENST00000729630, ENST00000729631, ENST00000729632, ENST00000729633, ENST00000729634

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000517689 — 4 exons

Exon	Start	End
ENSE00002105605	66194412	66194515
ENSE00002110879	66192709	66192967
ENSE00002126118	66196016	66196390
ENSE00002731194	66193258	66193311

Expression profiles

Bgee: expression breadth ubiquitous, 140 present calls, max score 85.57.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2212 / max 167.9193, expressed in 11 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
89182	0.1592	8
89181	0.0516	4
89183	0.0104	6

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
placenta	UBERON:0001987	85.57	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.83	gold quality
myocardium	UBERON:0002349	78.76	gold quality
cardiac muscle of right atrium	UBERON:0003379	71.39	gold quality
left ventricle myocardium	UBERON:0006566	71.36	gold quality
tendon of biceps brachii	UBERON:0008188	70.02	gold quality
colonic epithelium	UBERON:0000397	69.35	silver quality
kidney epithelium	UBERON:0004819	69.18	gold quality
upper arm skin	UBERON:0004263	68.34	gold quality
buccal mucosa cell	CL:0002336	65.15	gold quality
metanephros cortex	UBERON:0010533	63.82	gold quality
tendon	UBERON:0000043	63.50	gold quality
metanephros	UBERON:0000081	61.92	gold quality
monocyte	CL:0000576	61.12	gold quality
vena cava	UBERON:0004087	60.95	gold quality
ventricular zone	UBERON:0003053	60.93	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	60.43	gold quality
ganglionic eminence	UBERON:0004023	60.38	gold quality
calcaneal tendon	UBERON:0003701	59.51	gold quality
right coronary artery	UBERON:0001625	59.30	gold quality
apex of heart	UBERON:0002098	59.04	gold quality
cortex of kidney	UBERON:0001225	58.77	gold quality
right lobe of liver	UBERON:0001114	58.37	gold quality
ectocervix	UBERON:0012249	57.46	gold quality
mucosa of sigmoid colon	UBERON:0004993	57.29	gold quality
prefrontal cortex	UBERON:0000451	57.12	gold quality
sperm	CL:0000019	56.95	gold quality
pons	UBERON:0000988	56.86	gold quality
medial globus pallidus	UBERON:0002477	56.80	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.