LINC00970

Summary

LINC00970 (long intergenic non-protein coding RNA 970, HGNC:48730) is a long non-coding RNA gene on chromosome 1q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48730
Approved symbol	LINC00970
Name	long intergenic non-protein coding RNA 970
Location	1q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000203601
Ensembl biotype	lncRNA
Entrez	101978719
RNAcentral	URS00004C6AFE — lncRNA, 1129 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000650631, ENST00000715524, ENST00000715525, ENST00000715526

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000650631 — 9 exons

Exon	Start	End
ENSE00003832914	168695874	168696615
ENSE00003833668	169060412	169060519
ENSE00003834884	169020943	169021066
ENSE00003835031	169056184	169056233
ENSE00003835237	168701017	168701124
ENSE00003837929	168747443	168747604
ENSE00003839102	168733093	168733222
ENSE00003839330	168714221	168714346
ENSE00003839390	169103146	169103276

Expression profiles

Bgee: expression breadth broad, 75 present calls, max score 76.78.

Top tissues by expression

176 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.78	gold quality
cortical plate	UBERON:0005343	64.69	gold quality
sural nerve	UBERON:0015488	63.65	silver quality
ventricular zone	UBERON:0003053	60.46	gold quality
mammary duct	UBERON:0001765	55.69	gold quality
testis	UBERON:0000473	55.49	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.25	gold quality
blood	UBERON:0000178	53.17	silver quality
gall bladder	UBERON:0002110	51.20	gold quality
buccal mucosa cell	CL:0002336	51.07	gold quality
monocyte	CL:0000576	49.93	silver quality
prefrontal cortex	UBERON:0000451	48.88	gold quality
lower lobe of lung	UBERON:0008949	48.62	silver quality
muscle of leg	UBERON:0001383	47.86	silver quality
calcaneal tendon	UBERON:0003701	47.47	silver quality
thoracic mammary gland	UBERON:0005200	46.89	gold quality
mammary gland	UBERON:0001911	46.74	gold quality
islet of Langerhans	UBERON:0000006	46.72	silver quality
nasal cavity mucosa	UBERON:0001826	46.23	gold quality
bone marrow	UBERON:0002371	45.90	gold quality
adult mammalian kidney	UBERON:0000082	45.79	gold quality
right lobe of liver	UBERON:0001114	45.55	silver quality
gastrocnemius	UBERON:0001388	45.20	silver quality
minor salivary gland	UBERON:0001830	45.07	gold quality
pancreas	UBERON:0001264	45.04	silver quality
smooth muscle tissue	UBERON:0001135	45.03	silver quality
upper lobe of lung	UBERON:0008948	44.97	silver quality
kidney	UBERON:0002113	44.92	silver quality
vermiform appendix	UBERON:0001154	44.52	silver quality
saliva-secreting gland	UBERON:0001044	44.50	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.