LINC01037

Summary

LINC01037 (long intergenic non-protein coding RNA 1037, HGNC:49025) is a long non-coding RNA gene on chromosome 1q31.1.

At a glance

• GWAS associations: 4

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49025
Approved symbol	LINC01037
Name	long intergenic non-protein coding RNA 1037
Location	1q31.1
Locus type	RNA, long non-coding
Status	Approved
Entrez	106144535
RNAcentral	URS00000B85E5 — lncRNA, 424 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000199426 (1:187473515 G>A,T), RS1000369678 (1:187442817 A>C), RS1000413207 (1:187457610 T>C), RS1000441474 (1:187470498 GT>G,GTT), RS1000486167 (1:187472370 C>T), RS1000532130 (1:187474107 T>C,G), RS1000673259 (1:187441793 A>G,T), RS1000805729 (1:187462773 A>G), RS1000861971 (1:187447570 A>G), RS1000868765 (1:187457894 C>G), RS1000874772 (1:187462435 G>A), RS1001030892 (1:187454153 G>A), RS1001141110 (1:187460201 A>G), RS1001170052 (1:187445045 C>A), RS1001182357 (1:187446033 C>T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

4 associations (top):

Study	Trait	p-value
GCST004571_12	Iron status biomarkers (total iron binding capacity)	4.000000e-07
GCST004571_14	Iron status biomarkers (total iron binding capacity)	4.000000e-08
GCST004572_24	Iron status biomarkers (transferrin saturation)	4.000000e-07
GCST004572_26	Iron status biomarkers (transferrin saturation)	4.000000e-08

EFO canonical traits (1, from GWAS)

EFO ID	Trait name
EFO:0006334	total iron binding capacity

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

1 total (human), top 1 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
Aflatoxin B1	increases methylation	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.