LINC01038

Summary

LINC01038 (long intergenic non-protein coding RNA 1038, HGNC:49026) is a long non-coding RNA gene on chromosome 13q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49026
Approved symbol	LINC01038
Name	long intergenic non-protein coding RNA 1038
Location	13q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229011
Ensembl biotype	lncRNA
Entrez	102724076
RNAcentral	URS00007E3D13 — lncRNA, 462 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000457858, ENST00000821829

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457858 — 2 exons

Exon	Start	End
ENSE00004228994	79805325	79805689
ENSE00004228997	79804309	79804484

Expression profiles

Bgee: expression breadth broad, 39 present calls, max score 66.58.

Top tissues by expression

39 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.58	gold quality
right testis	UBERON:0004534	62.95	gold quality
testis	UBERON:0000473	60.50	gold quality
left testis	UBERON:0004533	60.43	gold quality
multicellular organism	UBERON:0000468	55.42	gold quality
blood	UBERON:0000178	54.21	gold quality
right lobe of thyroid gland	UBERON:0001119	54.10	gold quality
gastrocnemius	UBERON:0001388	53.48	gold quality
apex of heart	UBERON:0002098	52.70	gold quality
esophagus mucosa	UBERON:0002469	51.12	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	49.83	gold quality
heart left ventricle	UBERON:0002084	48.59	gold quality
amygdala	UBERON:0001876	48.23	gold quality
lower esophagus muscularis layer	UBERON:0035833	47.89	gold quality
body of pancreas	UBERON:0001150	47.73	gold quality
heart	UBERON:0000948	46.63	gold quality
thoracic aorta	UBERON:0001515	45.59	gold quality
nucleus accumbens	UBERON:0001882	44.38	silver quality
body of uterus	UBERON:0009853	44.20	gold quality
right atrium auricular region	UBERON:0006631	43.90	silver quality
muscle layer of sigmoid colon	UBERON:0035805	43.56	gold quality
intestine	UBERON:0000160	43.35	gold quality
thoracic mammary gland	UBERON:0005200	43.33	gold quality
ascending aorta	UBERON:0001496	42.73	silver quality
skin of leg	UBERON:0001511	42.58	gold quality
spleen	UBERON:0002106	41.97	silver quality
subcutaneous adipose tissue	UBERON:0002190	41.89	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	40.91	silver quality
skin of abdomen	UBERON:0001416	40.26	silver quality
prostate gland	UBERON:0002367	40.07	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.