LINC01043

Summary

LINC01043 (long intergenic non-protein coding RNA 1043, HGNC:49031) is a long non-coding RNA gene on chromosome 13q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49031
Approved symbol	LINC01043
Name	long intergenic non-protein coding RNA 1043
Location	13q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260343
Ensembl biotype	lncRNA
Entrez	101928752
RNAcentral	URS0000A76E1D — lncRNA, 6905 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000565936

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000565936 — 2 exons

Exon	Start	End
ENSE00002588230	112321112	112321758
ENSE00002612592	112313467	112319716

Expression profiles

Bgee: expression breadth broad, 24 present calls, max score 69.10.

Top tissues by expression

24 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
esophagogastric junction muscularis propria	UBERON:0035841	69.10	gold quality
right frontal lobe	UBERON:0002810	58.73	gold quality
left testis	UBERON:0004533	58.53	gold quality
testis	UBERON:0000473	57.11	gold quality
liver	UBERON:0002107	56.48	silver quality
ganglionic eminence	UBERON:0004023	56.06	silver quality
right testis	UBERON:0004534	55.10	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	53.23	gold quality
multicellular organism	UBERON:0000468	53.10	gold quality
right lobe of liver	UBERON:0001114	50.33	gold quality
lung	UBERON:0002048	49.49	gold quality
monocyte	CL:0000576	48.18	silver quality
left coronary artery	UBERON:0001626	46.92	gold quality
subcutaneous adipose tissue	UBERON:0002190	46.63	gold quality
adipose tissue	UBERON:0001013	46.38	gold quality
gastrocnemius	UBERON:0001388	45.67	gold quality
omental fat pad	UBERON:0010414	45.66	gold quality
body of pancreas	UBERON:0001150	45.10	gold quality
thoracic mammary gland	UBERON:0005200	44.14	gold quality
lower esophagus muscularis layer	UBERON:0035833	42.63	gold quality
small intestine Peyer’s patch	UBERON:0003454	40.97	silver quality
left adrenal gland	UBERON:0001234	40.40	silver quality
skin of abdomen	UBERON:0001416	39.95	silver quality
skin of leg	UBERON:0001511	36.36	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.