LINC01044

Summary

LINC01044 (long intergenic non-protein coding RNA 1044, HGNC:49032) is a long non-coding RNA gene on chromosome 13q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49032
Approved symbol	LINC01044
Name	long intergenic non-protein coding RNA 1044
Location	13q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223626
Ensembl biotype	lncRNA
Entrez	104266956
RNAcentral	URS000003C588 — lncRNA, 657 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000413637

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413637 — 3 exons

Exon	Start	End
ENSE00001662926	112322567	112322756
ENSE00001702951	112327246	112327545
ENSE00001753988	112331059	112331225

Expression profiles

Bgee: expression breadth broad, 69 present calls, max score 73.86.

Top tissues by expression

69 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.86	gold quality
ventricular zone	UBERON:0003053	66.61	gold quality
ganglionic eminence	UBERON:0004023	60.38	gold quality
monocyte	CL:0000576	56.50	gold quality
liver	UBERON:0002107	55.04	gold quality
blood	UBERON:0000178	53.88	gold quality
stromal cell of endometrium	CL:0002255	51.72	silver quality
prefrontal cortex	UBERON:0000451	50.16	gold quality
adult mammalian kidney	UBERON:0000082	50.10	gold quality
left adrenal gland cortex	UBERON:0035825	49.57	gold quality
right lobe of liver	UBERON:0001114	49.29	silver quality
thoracic mammary gland	UBERON:0005200	49.15	gold quality
right testis	UBERON:0004534	48.34	gold quality
testis	UBERON:0000473	48.22	gold quality
calcaneal tendon	UBERON:0003701	48.02	silver quality
subcutaneous adipose tissue	UBERON:0002190	47.84	gold quality
adipose tissue	UBERON:0001013	47.42	gold quality
left testis	UBERON:0004533	47.12	gold quality
multicellular organism	UBERON:0000468	46.97	gold quality
gall bladder	UBERON:0002110	46.93	gold quality
tibial nerve	UBERON:0001323	46.54	gold quality
omental fat pad	UBERON:0010414	46.44	gold quality
frontal cortex	UBERON:0001870	46.43	gold quality
transverse colon	UBERON:0001157	46.29	gold quality
left coronary artery	UBERON:0001626	46.18	gold quality
endometrium	UBERON:0001295	45.70	silver quality
muscle of leg	UBERON:0001383	45.27	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	44.92	gold quality
small intestine Peyer’s patch	UBERON:0003454	44.61	gold quality
amygdala	UBERON:0001876	44.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.