LINC01056

Summary

LINC01056 (long intergenic non-protein coding RNA 1056, HGNC:49050) is a long non-coding RNA gene on chromosome 20q13.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49050
Approved symbol	LINC01056
Name	long intergenic non-protein coding RNA 1056
Location	20q13.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237119
Ensembl biotype	lncRNA
Entrez	100144597
RNAcentral	URS0000299A4B — lncRNA, 1234 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000455711

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455711 — 6 exons

Exon	Start	End
ENSE00001602695	63038011	63038185
ENSE00001604435	63053512	63053863
ENSE00001640944	63049512	63049656
ENSE00001716977	63052905	63053266
ENSE00001739420	63048856	63048925
ENSE00001777754	63051622	63051751

Expression profiles

Bgee: expression breadth broad, 13 present calls, max score 58.06.

Top tissues by expression

167 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	58.06	gold quality
monocyte	CL:0000576	53.49	gold quality
left testis	UBERON:0004533	51.66	gold quality
right testis	UBERON:0004534	51.43	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	50.78	silver quality
testis	UBERON:0000473	50.22	gold quality
vermiform appendix	UBERON:0001154	46.42	silver quality
buccal mucosa cell	CL:0002336	45.39	gold quality
gastrocnemius	UBERON:0001388	44.62	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
amniotic fluid	UBERON:0000173	42.88	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
blood	UBERON:0000178	42.09	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
anatomical system	UBERON:0000467	41.52	gold quality
multicellular organism	UBERON:0000468	41.45	silver quality
material anatomical entity	UBERON:0000465	41.43	silver quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
cardiac ventricle	UBERON:0002082	41.15	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality
mucosa of paranasal sinus	UBERON:0005030	40.98	gold quality
nasal cavity mucosa	UBERON:0001826	40.63	gold quality
jejunal mucosa	UBERON:0000399	40.59	gold quality
endometrium	UBERON:0001295	40.57	gold quality
biceps brachii	UBERON:0001507	40.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.