LINC01065

Summary

LINC01065 (long intergenic non-protein coding RNA 1065, HGNC:49103) is a long non-coding RNA gene on chromosome 13q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49103
Approved symbol	LINC01065
Name	long intergenic non-protein coding RNA 1065
Location	13q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237092
Ensembl biotype	lncRNA
Entrez	102723875
RNAcentral	URS00007E4F25 — lncRNA, 565 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000417989, ENST00000656207, ENST00000659074, ENST00000660057, ENST00000663896, ENST00000664555, ENST00000666982, ENST00000669246, ENST00000810025, ENST00000810026

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417989 — 3 exons

Exon	Start	End
ENSE00001642200	53151704	53151808
ENSE00001778498	53148257	53148364
ENSE00001795031	53146539	53146902

Expression profiles

Bgee: expression breadth broad, 74 present calls, max score 80.32.

Top tissues by expression

74 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.32	silver quality
right testis	UBERON:0004534	73.71	gold quality
left testis	UBERON:0004533	73.38	gold quality
testis	UBERON:0000473	73.01	gold quality
sural nerve	UBERON:0015488	65.96	gold quality
liver	UBERON:0002107	59.65	silver quality
adrenal gland	UBERON:0002369	55.33	silver quality
monocyte	CL:0000576	55.02	gold quality
leukocyte	CL:0000738	54.95	gold quality
skeletal muscle tissue	UBERON:0001134	54.48	gold quality
multicellular organism	UBERON:0000468	52.63	gold quality
islet of Langerhans	UBERON:0000006	52.35	gold quality
body of pancreas	UBERON:0001150	52.29	gold quality
right lobe of thyroid gland	UBERON:0001119	51.95	gold quality
thyroid gland	UBERON:0002046	51.34	gold quality
tibial nerve	UBERON:0001323	51.30	gold quality
duodenum	UBERON:0002114	50.67	gold quality
blood	UBERON:0000178	50.27	gold quality
right frontal lobe	UBERON:0002810	49.55	gold quality
left lobe of thyroid gland	UBERON:0001120	49.50	gold quality
lymph node	UBERON:0000029	49.21	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.08	gold quality
muscle of leg	UBERON:0001383	47.52	gold quality
gastrocnemius	UBERON:0001388	46.87	gold quality
saliva-secreting gland	UBERON:0001044	46.79	gold quality
prefrontal cortex	UBERON:0000451	46.55	gold quality
minor salivary gland	UBERON:0001830	46.05	gold quality
vagina	UBERON:0000996	45.36	gold quality
caudate nucleus	UBERON:0001873	45.15	silver quality
heart left ventricle	UBERON:0002084	44.89	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.