LINC01066

Summary

LINC01066 (long intergenic non-protein coding RNA 1066, HGNC:49104) is a long non-coding RNA gene on chromosome 13q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49104
Approved symbol	LINC01066
Name	long intergenic non-protein coding RNA 1066
Location	13q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230403
Ensembl biotype	lncRNA
Entrez	106144544
RNAcentral	URS0002853A64 — lncRNA, 518 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000415283, ENST00000801432, ENST00000801433

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000415283 — 2 exons

Exon	Start	End
ENSE00004191055	30995152	30995475
ENSE00004191056	30996054	30996302

Expression profiles

Bgee: expression breadth broad, 54 present calls, max score 75.28.

Top tissues by expression

54 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortex of kidney	UBERON:0001225	75.28	gold quality
left testis	UBERON:0004533	71.83	gold quality
right testis	UBERON:0004534	71.16	gold quality
testis	UBERON:0000473	71.07	gold quality
gastrocnemius	UBERON:0001388	61.29	gold quality
prefrontal cortex	UBERON:0000451	59.50	gold quality
monocyte	CL:0000576	59.28	gold quality
multicellular organism	UBERON:0000468	54.08	gold quality
tibial artery	UBERON:0007610	53.65	gold quality
blood	UBERON:0000178	51.28	silver quality
body of pancreas	UBERON:0001150	50.73	gold quality
hypothalamus	UBERON:0001898	50.16	gold quality
frontal cortex	UBERON:0001870	49.90	gold quality
anterior cingulate cortex	UBERON:0009835	48.77	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.49	gold quality
Ammon’s horn	UBERON:0001954	47.96	gold quality
cerebral cortex	UBERON:0000956	47.77	gold quality
body of stomach	UBERON:0001161	47.66	gold quality
nucleus accumbens	UBERON:0001882	47.23	gold quality
brain	UBERON:0000955	47.16	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	47.16	gold quality
stomach	UBERON:0000945	46.98	gold quality
right hemisphere of cerebellum	UBERON:0014890	46.96	gold quality
substantia nigra	UBERON:0002038	46.68	gold quality
right coronary artery	UBERON:0001625	46.57	gold quality
omental fat pad	UBERON:0010414	46.46	gold quality
caudate nucleus	UBERON:0001873	46.38	gold quality
putamen	UBERON:0001874	46.20	gold quality
cerebellar hemisphere	UBERON:0002245	46.19	silver quality
adipose tissue	UBERON:0001013	45.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.32

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.