LINC01070

Summary

LINC01070 (long intergenic non-protein coding RNA 1070, HGNC:49110) is a long non-coding RNA gene on chromosome 13q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49110
Approved symbol	LINC01070
Name	long intergenic non-protein coding RNA 1070
Location	13q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260102
Ensembl biotype	lncRNA
Entrez	101928698
RNAcentral	URS000075ACC7 — lncRNA, 1305 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000561786, ENST00000668240, ENST00000819176, ENST00000819177, ENST00000819178, ENST00000819179, ENST00000819180, ENST00000819181, ENST00000819182, ENST00000819183

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561786 — 2 exons

Exon	Start	End
ENSE00002584416	112197350	112197408
ENSE00002604312	112198231	112201000

Expression profiles

Bgee: expression breadth broad, 50 present calls, max score 71.72.

Top tissues by expression

50 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
small intestine Peyer’s patch	UBERON:0003454	71.72	gold quality
colonic epithelium	UBERON:0000397	67.22	silver quality
transverse colon	UBERON:0001157	65.08	gold quality
bone marrow cell	CL:0002092	64.38	silver quality
tonsil	UBERON:0002372	61.41	silver quality
small intestine	UBERON:0002108	59.81	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.60	gold quality
body of stomach	UBERON:0001161	55.22	gold quality
subcutaneous adipose tissue	UBERON:0002190	53.89	gold quality
adipose tissue	UBERON:0001013	53.78	gold quality
omental fat pad	UBERON:0010414	53.43	gold quality
Ammon’s horn	UBERON:0001954	52.83	gold quality
liver	UBERON:0002107	52.79	gold quality
right lobe of liver	UBERON:0001114	51.97	gold quality
thoracic mammary gland	UBERON:0005200	51.51	gold quality
muscle of leg	UBERON:0001383	50.83	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	50.66	gold quality
prefrontal cortex	UBERON:0000451	50.54	silver quality
multicellular organism	UBERON:0000468	49.44	gold quality
blood	UBERON:0000178	49.35	gold quality
gastrocnemius	UBERON:0001388	47.63	silver quality
ascending aorta	UBERON:0001496	47.21	gold quality
lung	UBERON:0002048	46.59	gold quality
thoracic aorta	UBERON:0001515	45.96	gold quality
heart	UBERON:0000948	45.86	gold quality
heart left ventricle	UBERON:0002084	45.55	gold quality
testis	UBERON:0000473	45.51	gold quality
left coronary artery	UBERON:0001626	45.50	gold quality
left testis	UBERON:0004533	45.46	gold quality
right lung	UBERON:0002167	45.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.