LINC01074

Summary

LINC01074 (long intergenic non-protein coding RNA 1074, HGNC:49117) is a long non-coding RNA gene on chromosome 13q21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49117
Approved symbol	LINC01074
Name	long intergenic non-protein coding RNA 1074
Location	13q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227611
Ensembl biotype	lncRNA
Entrez	106144607
RNAcentral	URS000048547D — lncRNA, 555 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000422527

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000422527 — 2 exons

Exon	Start	End
ENSE00001682921	62321926	62322398
ENSE00001748644	62321305	62321386

Expression profiles

Bgee: expression breadth broad, 24 present calls, max score 85.60.

Top tissues by expression

24 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.60	gold quality
omental fat pad	UBERON:0010414	56.12	gold quality
endometrium	UBERON:0001295	54.08	silver quality
monocyte	CL:0000576	53.36	gold quality
gastrocnemius	UBERON:0001388	47.76	silver quality
muscle layer of sigmoid colon	UBERON:0035805	43.29	silver quality
left adrenal gland	UBERON:0001234	41.70	silver quality
lower esophagus muscularis layer	UBERON:0035833	41.51	silver quality
nucleus accumbens	UBERON:0001882	41.41	gold quality
hypothalamus	UBERON:0001898	41.16	silver quality
amygdala	UBERON:0001876	40.52	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	40.48	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	39.91	gold quality
substantia nigra	UBERON:0002038	39.60	gold quality
tibial nerve	UBERON:0001323	38.81	silver quality
putamen	UBERON:0001874	37.72	silver quality
caudate nucleus	UBERON:0001873	37.66	silver quality
Brodmann (1909) area 9	UBERON:0013540	36.86	silver quality
Ammon’s horn	UBERON:0001954	36.68	silver quality
anterior cingulate cortex	UBERON:0009835	35.06	silver quality
testis	UBERON:0000473	31.91	gold quality
right testis	UBERON:0004534	31.34	silver quality
left testis	UBERON:0004533	30.98	gold quality
right frontal lobe	UBERON:0002810	28.56	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.