LINC01077

Summary

LINC01077 (long intergenic non-protein coding RNA 1077, HGNC:49120) is a long non-coding RNA gene on chromosome 13q14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49120
Approved symbol	LINC01077
Name	long intergenic non-protein coding RNA 1077
Location	13q14.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233456
Ensembl biotype	lncRNA
Entrez	107080621
RNAcentral	URS0002123231 — lncRNA, 1668 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000452288, ENST00000796623, ENST00000796624, ENST00000796625, ENST00000796626

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452288 — 2 exons

Exon	Start	End
ENSE00001674696	48573108	48573317
ENSE00001721563	48570639	48570841

Expression profiles

Bgee: expression breadth broad, 51 present calls, max score 88.14.

Top tissues by expression

51 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortex of kidney	UBERON:0001225	88.14	gold quality
sural nerve	UBERON:0015488	69.70	gold quality
prefrontal cortex	UBERON:0000451	60.22	gold quality
monocyte	CL:0000576	58.32	gold quality
gall bladder	UBERON:0002110	55.85	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.28	gold quality
blood	UBERON:0000178	53.62	gold quality
body of stomach	UBERON:0001161	52.10	gold quality
granulocyte	CL:0000094	49.68	silver quality
gastrocnemius	UBERON:0001388	49.51	gold quality
stomach	UBERON:0000945	47.75	gold quality
heart left ventricle	UBERON:0002084	46.00	gold quality
lower esophagus mucosa	UBERON:0035834	45.84	silver quality
skin of leg	UBERON:0001511	45.75	gold quality
myometrium	UBERON:0001296	45.68	gold quality
spleen	UBERON:0002106	45.55	gold quality
prostate gland	UBERON:0002367	45.41	gold quality
esophagus mucosa	UBERON:0002469	45.39	gold quality
muscle layer of sigmoid colon	UBERON:0035805	45.11	gold quality
tibial nerve	UBERON:0001323	44.86	gold quality
zone of skin	UBERON:0000014	44.59	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	44.54	gold quality
lower esophagus	UBERON:0013473	44.48	gold quality
minor salivary gland	UBERON:0001830	44.40	gold quality
rectum	UBERON:0001052	44.38	gold quality
lower esophagus muscularis layer	UBERON:0035833	44.19	gold quality
substantia nigra	UBERON:0002038	44.05	gold quality
tibial artery	UBERON:0007610	43.98	gold quality
intestine	UBERON:0000160	43.86	gold quality
putamen	UBERON:0001874	43.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.