LINC01095

Summary

LINC01095 (long intergenic non-protein coding RNA 1095, HGNC:49220) is a long non-coding RNA gene on chromosome 4q31.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49220
Approved symbol	LINC01095
Name	long intergenic non-protein coding RNA 1095
Location	4q31.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248809
Ensembl biotype	lncRNA
Entrez	100505545
RNAcentral	URS000075EB78 — lncRNA, 1200 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 61 — 61 lncRNA

ENST00000503593, ENST00000505848, ENST00000507726, ENST00000512063, ENST00000513023, ENST00000515703, ENST00000652178, ENST00000652711, ENST00000790015, ENST00000790016, ENST00000790017, ENST00000790018, ENST00000790019, ENST00000790020, ENST00000790021, ENST00000790022, ENST00000790023, ENST00000790024, ENST00000790025, ENST00000790026, ENST00000790027, ENST00000790028, ENST00000790029, ENST00000790030, ENST00000790031, ENST00000790032, ENST00000790033, ENST00000790034, ENST00000790035, ENST00000790036, ENST00000790037, ENST00000790038, ENST00000790039, ENST00000790040, ENST00000790041, ENST00000790042, ENST00000790043, ENST00000790045, ENST00000790046, ENST00000790047, ENST00000790048, ENST00000790049, ENST00000790050, ENST00000790051, ENST00000790052, ENST00000790053, ENST00000790054, ENST00000790055, ENST00000790056, ENST00000790057, ENST00000790058, ENST00000790059, ENST00000790060, ENST00000790061, ENST00000790062, ENST00000790063, ENST00000790064, ENST00000790065, ENST00000790066, ENST00000790067, ENST00000790068

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503593 — 4 exons

Exon	Start	End
ENSE00002040052	146093805	146093968
ENSE00003848663	146108102	146108171
ENSE00004169924	146121746	146121917
ENSE00004169937	146077712	146078147

Expression profiles

Bgee: expression breadth ubiquitous, 116 present calls, max score 96.49.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0423 / max 36.5379, expressed in 4 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
54252	0.0216	4
54253	0.0180	3
54251	0.0027	1

Top tissues by expression

215 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	96.49	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.75	gold quality
right testis	UBERON:0004534	89.66	gold quality
left testis	UBERON:0004533	89.58	gold quality
testis	UBERON:0000473	86.33	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.25	gold quality
tibialis anterior	UBERON:0001385	70.77	silver quality
pancreatic ductal cell	CL:0002079	67.09	silver quality
ileal mucosa	UBERON:0000331	65.92	silver quality
gall bladder	UBERON:0002110	64.49	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.29	gold quality
prostate gland	UBERON:0002367	60.07	gold quality
placenta	UBERON:0001987	59.01	gold quality
vena cava	UBERON:0004087	58.36	gold quality
ventricular zone	UBERON:0003053	58.24	silver quality
cerebellar vermis	UBERON:0004720	58.19	gold quality
deltoid	UBERON:0001476	57.48	silver quality
right coronary artery	UBERON:0001625	57.10	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	56.91	gold quality
epithelial cell of pancreas	CL:0000083	55.51	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
monocyte	CL:0000576	54.23	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
leukocyte	CL:0000738	53.67	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
left coronary artery	UBERON:0001626	53.19	gold quality
coronary artery	UBERON:0001621	52.73	gold quality
adult organism	UBERON:0007023	52.50	silver quality
right atrium auricular region	UBERON:0006631	52.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.