LINC01101

Summary

LINC01101 (long intergenic non-protein coding RNA 1101, HGNC:25923) is a long non-coding RNA gene on chromosome 2q14.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:25923
Approved symbol	LINC01101
Name	long intergenic non-protein coding RNA 1101
Location	2q14.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ14816
Ensembl gene	ENSG00000280409
Ensembl biotype	lncRNA
Entrez	84931
RNAcentral	URS0000759F46 — lncRNA, 2015 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000622953, ENST00000740733

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000622953 — 1 exons

Exon	Start	End
ENSE00003759305	120464335	120466218

Expression profiles

Bgee: expression breadth broad, 33 present calls, max score 84.26.

Top tissues by expression

179 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.26	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	65.19	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	63.93	gold quality
mucosa of paranasal sinus	UBERON:0005030	61.87	gold quality
myocardium	UBERON:0002349	61.02	gold quality
biceps brachii	UBERON:0001507	59.53	gold quality
skin of hip	UBERON:0001554	59.00	silver quality
nasal cavity epithelium	UBERON:0005384	58.61	gold quality
ventricular zone	UBERON:0003053	58.12	silver quality
vena cava	UBERON:0004087	58.06	gold quality
substantia nigra pars reticulata	UBERON:0001966	58.00	gold quality
ganglionic eminence	UBERON:0004023	57.78	silver quality
minor salivary gland	UBERON:0001830	57.74	gold quality
metanephros	UBERON:0000081	57.58	gold quality
caecum	UBERON:0001153	57.36	gold quality
deltoid	UBERON:0001476	57.26	gold quality
nucleus accumbens	UBERON:0001882	57.15	gold quality
saliva-secreting gland	UBERON:0001044	56.99	gold quality
inferior vagus X ganglion	UBERON:0005363	56.52	gold quality
tendon of biceps brachii	UBERON:0008188	56.39	gold quality
putamen	UBERON:0001874	56.19	gold quality
subthalamic nucleus	UBERON:0001906	56.16	gold quality
omental fat pad	UBERON:0010414	56.10	gold quality
saphenous vein	UBERON:0007318	56.02	gold quality
adrenal cortex	UBERON:0001235	55.96	gold quality
peritoneum	UBERON:0002358	55.89	gold quality
substantia nigra pars compacta	UBERON:0001965	55.80	gold quality
trigeminal ganglion	UBERON:0001675	55.77	gold quality
tendon	UBERON:0000043	55.73	gold quality
mouth mucosa	UBERON:0003729	55.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.32

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• HPV-positive cervical neoplasia patients exhibit significantly reduced LINC01101 and LINC00277 expression levels. (PMID:28767188)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.