LINC01104

Summary

LINC01104 (long intergenic non-protein coding RNA 1104, HGNC:49226) is a long non-coding RNA gene on chromosome 2q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49226
Approved symbol	LINC01104
Name	long intergenic non-protein coding RNA 1104
Location	2q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232084
Ensembl biotype	lncRNA
Entrez	150577
RNAcentral	URS000053D37B — lncRNA, 3115 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000441036, ENST00000452354, ENST00000841887, ENST00000841888, ENST00000841889, ENST00000841890

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441036 — 3 exons

Exon	Start	End
ENSE00001742390	100247112	100247238
ENSE00001794509	100242631	100242885
ENSE00001806334	100249064	100249262

Expression profiles

Bgee: expression breadth broad, 55 present calls, max score 69.45.

Top tissues by expression

170 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	69.45	gold quality
cortical plate	UBERON:0005343	63.82	gold quality
monocyte	CL:0000576	53.55	gold quality
cerebellar vermis	UBERON:0004720	52.97	gold quality
vermiform appendix	UBERON:0001154	51.83	gold quality
Brodmann (1909) area 9	UBERON:0013540	50.19	gold quality
islet of Langerhans	UBERON:0000006	49.52	silver quality
caecum	UBERON:0001153	46.26	gold quality
testis	UBERON:0000473	45.96	silver quality
lymph node	UBERON:0000029	45.74	silver quality
gastrocnemius	UBERON:0001388	45.58	silver quality
smooth muscle tissue	UBERON:0001135	44.12	gold quality
right atrium auricular region	UBERON:0006631	44.11	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	44.03	silver quality
tonsil	UBERON:0002372	43.81	silver quality
body of pancreas	UBERON:0001150	43.79	silver quality
trigeminal ganglion	UBERON:0001675	43.45	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
skin of leg	UBERON:0001511	43.20	gold quality
muscle layer of sigmoid colon	UBERON:0035805	42.89	gold quality
heart left ventricle	UBERON:0002084	42.71	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
apex of heart	UBERON:0002098	42.54	silver quality
cardiac ventricle	UBERON:0002082	42.36	silver quality
heart	UBERON:0000948	42.16	gold quality
lower lobe of lung	UBERON:0008949	42.10	silver quality
prefrontal cortex	UBERON:0000451	42.06	gold quality
cardiac atrium	UBERON:0002081	42.05	silver quality
spleen	UBERON:0002106	42.05	silver quality
putamen	UBERON:0001874	41.91	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.