LINC01147

Summary

LINC01147 (long intergenic non-protein coding RNA 1147, HGNC:49468) is a long non-coding RNA gene on chromosome 14q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49468
Approved symbol	LINC01147
Name	long intergenic non-protein coding RNA 1147
Location	14q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258826
Ensembl biotype	lncRNA
Entrez	101928791
RNAcentral	URS00001AD995 — lncRNA, 426 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 23 — 23 lncRNA

ENST00000553921, ENST00000554433, ENST00000557631, ENST00000716957, ENST00000716958, ENST00000716959, ENST00000716960, ENST00000716961, ENST00000828838, ENST00000828839, ENST00000828840, ENST00000828841, ENST00000828842, ENST00000828843, ENST00000828844, ENST00000828845, ENST00000828846, ENST00000828847, ENST00000828848, ENST00000828849, ENST00000828850, ENST00000828851, ENST00000828852

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000553921 — 5 exons

Exon	Start	End
ENSE00002433607	88018605	88018703
ENSE00002451781	88036279	88036319
ENSE00002525067	88034592	88034682
ENSE00004031246	88026088	88026232
ENSE00004031247	88023675	88023765

Expression profiles

Bgee: expression breadth broad, 90 present calls, max score 97.94.

Top tissues by expression

90 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	97.94	gold quality
bone marrow cell	CL:0002092	70.21	silver quality
liver	UBERON:0002107	63.90	gold quality
right testis	UBERON:0004534	63.42	gold quality
left testis	UBERON:0004533	62.21	gold quality
testis	UBERON:0000473	62.12	gold quality
blood	UBERON:0000178	60.32	gold quality
right lung	UBERON:0002167	57.99	gold quality
bone marrow	UBERON:0002371	57.96	silver quality
urinary bladder	UBERON:0001255	57.11	gold quality
right lobe of liver	UBERON:0001114	55.03	gold quality
superior frontal gyrus	UBERON:0002661	54.88	gold quality
prefrontal cortex	UBERON:0000451	54.71	gold quality
leukocyte	CL:0000738	54.70	gold quality
monocyte	CL:0000576	54.56	gold quality
lower esophagus mucosa	UBERON:0035834	53.36	gold quality
gall bladder	UBERON:0002110	52.30	gold quality
calcaneal tendon	UBERON:0003701	52.10	silver quality
islet of Langerhans	UBERON:0000006	52.01	gold quality
lymph node	UBERON:0000029	51.75	gold quality
multicellular organism	UBERON:0000468	51.74	gold quality
pancreas	UBERON:0001264	51.60	gold quality
vermiform appendix	UBERON:0001154	51.24	gold quality
myometrium	UBERON:0001296	49.83	gold quality
muscle of leg	UBERON:0001383	48.62	silver quality
placenta	UBERON:0001987	48.15	gold quality
spleen	UBERON:0002106	47.65	gold quality
adrenal tissue	UBERON:0018303	47.45	silver quality
lung	UBERON:0002048	47.42	gold quality
hindlimb stylopod muscle	UBERON:0004252	46.53	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.