LINC01150

Summary

LINC01150 (long intergenic non-protein coding RNA 1150, HGNC:49469) is a long non-coding RNA gene on chromosome 11p15.5.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49469
Approved symbol	LINC01150
Name	long intergenic non-protein coding RNA 1150
Location	11p15.5
Locus type	RNA, long non-coding
Status	Approved
Aliases	2G7, TCONS_00019134
Ensembl gene	ENSG00000229671
Ensembl biotype	lncRNA
Entrez	101927624
RNAcentral	URS000075AE86 — lncRNA, 1203 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000455671, ENST00000660469

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455671 — 5 exons

Exon	Start	End
ENSE00001624619	1907832	1908656
ENSE00001735509	1903104	1903256
ENSE00001753562	1902590	1902724
ENSE00003835271	1901716	1901770
ENSE00003836238	1897015	1897145

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 82.14.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.5153 / max 94.2967, expressed in 157 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
112549	0.2784	89
112548	0.2370	86

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.14	gold quality
placenta	UBERON:0001987	74.77	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.81	gold quality
monocyte	CL:0000576	67.79	gold quality
leukocyte	CL:0000738	67.57	gold quality
bone marrow	UBERON:0002371	67.55	gold quality
skeletal muscle tissue	UBERON:0001134	66.70	silver quality
bone marrow cell	CL:0002092	66.24	silver quality
granulocyte	CL:0000094	61.28	gold quality
blood	UBERON:0000178	60.60	gold quality
tonsil	UBERON:0002372	60.16	gold quality
lymph node	UBERON:0000029	58.31	gold quality
right coronary artery	UBERON:0001625	58.09	gold quality
ganglionic eminence	UBERON:0004023	57.27	gold quality
vermiform appendix	UBERON:0001154	56.91	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.98	silver quality
descending thoracic aorta	UBERON:0002345	54.88	gold quality
smooth muscle tissue	UBERON:0001135	54.57	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	54.03	gold quality
prefrontal cortex	UBERON:0000451	53.25	gold quality
subcutaneous adipose tissue	UBERON:0002190	53.02	gold quality
right adrenal gland cortex	UBERON:0035827	52.87	gold quality
rectum	UBERON:0001052	52.85	gold quality
gall bladder	UBERON:0002110	52.60	gold quality
right lung	UBERON:0002167	52.53	gold quality
adipose tissue	UBERON:0001013	52.05	gold quality
thoracic aorta	UBERON:0001515	51.81	gold quality
left coronary artery	UBERON:0001626	51.70	gold quality
duodenum	UBERON:0002114	51.48	gold quality
urinary bladder	UBERON:0001255	51.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.71

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.