LINC01152

Summary

LINC01152 (long intergenic non-protein coding RNA 1152, HGNC:16752) is a long non-coding RNA gene on chromosome 17q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:16752
Approved symbol	LINC01152
Name	long intergenic non-protein coding RNA 1152
Location	17q24.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00025128, CMPD, RP11-84E24.3
Ensembl gene	ENSG00000256124
Ensembl biotype	lncRNA
Entrez	102606463
RNAcentral	URS000075C156 — lncRNA, 3578 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000472655, ENST00000538693, ENST00000538810, ENST00000655287, ENST00000656107, ENST00000837745, ENST00000837746, ENST00000837747

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000472655 — 3 exons

Exon	Start	End
ENSE00002323026	72037045	72037131
ENSE00003030987	72038005	72041310
ENSE00003868996	72030561	72030851

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 84.57.

FANTOM5 (CAGE): breadth broad, TPM avg 0.7358 / max 29.7200, expressed in 344 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
162526	0.5116	274
162527	0.1204	46
162528	0.1038	46

Top tissues by expression

115 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	84.57	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.40	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.71	gold quality
thoracic mammary gland	UBERON:0005200	79.38	gold quality
body of pancreas	UBERON:0001150	77.87	gold quality
saliva-secreting gland	UBERON:0001044	77.34	gold quality
minor salivary gland	UBERON:0001830	77.03	gold quality
skin of leg	UBERON:0001511	74.15	gold quality
zone of skin	UBERON:0000014	72.49	gold quality
sural nerve	UBERON:0015488	72.11	silver quality
skin of abdomen	UBERON:0001416	70.85	gold quality
pancreas	UBERON:0001264	70.70	gold quality
ventricular zone	UBERON:0003053	69.28	gold quality
monocyte	CL:0000576	68.96	gold quality
tonsil	UBERON:0002372	68.70	gold quality
myometrium	UBERON:0001296	66.46	silver quality
ganglionic eminence	UBERON:0004023	65.74	gold quality
nucleus accumbens	UBERON:0001882	65.68	gold quality
vastus lateralis	UBERON:0001379	64.98	gold quality
amygdala	UBERON:0001876	63.37	gold quality
temporal lobe	UBERON:0001871	63.20	gold quality
cortical plate	UBERON:0005343	63.07	gold quality
anterior cingulate cortex	UBERON:0009835	62.89	gold quality
caudate nucleus	UBERON:0001873	62.60	gold quality
prefrontal cortex	UBERON:0000451	62.47	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.03	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.46	gold quality
putamen	UBERON:0001874	61.45	gold quality
Ammon’s horn	UBERON:0001954	60.79	gold quality
frontal cortex	UBERON:0001870	60.55	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	7.06

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.