LINC01160

Summary

LINC01160 (long intergenic non-protein coding RNA 1160, HGNC:49525) is a long non-coding RNA gene on chromosome 1p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49525
Approved symbol	LINC01160
Name	long intergenic non-protein coding RNA 1160
Location	1p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231346
Ensembl biotype	lncRNA
Entrez	100129269
RNAcentral	URS000075F019 — lncRNA, 1542 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000441004, ENST00000450155, ENST00000453988

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441004 — 5 exons

Exon	Start	End
ENSE00001550515	111608136	111608324
ENSE00001721807	111599865	111600095
ENSE00001741063	111604369	111604500
ENSE00001753532	111602192	111602333
ENSE00001783835	111604629	111604702

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 87.43.

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.43	gold quality
lower esophagus	UBERON:0013473	85.51	gold quality
lower esophagus muscularis layer	UBERON:0035833	85.50	gold quality
muscle layer of sigmoid colon	UBERON:0035805	84.17	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	83.64	gold quality
popliteal artery	UBERON:0002250	82.52	gold quality
tibial artery	UBERON:0007610	82.50	gold quality
lower esophagus mucosa	UBERON:0035834	80.21	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.58	gold quality
mucosa of stomach	UBERON:0001199	78.87	gold quality
right coronary artery	UBERON:0001625	78.01	gold quality
esophagus	UBERON:0001043	75.44	gold quality
myometrium	UBERON:0001296	75.20	gold quality
monocyte	CL:0000576	74.86	gold quality
colonic epithelium	UBERON:0000397	74.59	gold quality
prostate gland	UBERON:0002367	74.57	gold quality
fundus of stomach	UBERON:0001160	74.24	gold quality
colon	UBERON:0001155	73.95	gold quality
body of uterus	UBERON:0009853	73.88	gold quality
leukocyte	CL:0000738	73.81	gold quality
sural nerve	UBERON:0015488	73.78	gold quality
left uterine tube	UBERON:0001303	73.13	gold quality
left coronary artery	UBERON:0001626	73.10	gold quality
bone marrow cell	CL:0002092	72.98	gold quality
blood	UBERON:0000178	72.28	gold quality
descending thoracic aorta	UBERON:0002345	72.28	gold quality
smooth muscle tissue	UBERON:0001135	71.94	gold quality
apex of heart	UBERON:0002098	71.34	gold quality
intestine	UBERON:0000160	71.32	gold quality
thoracic aorta	UBERON:0001515	71.04	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.57

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Transcription factor STAT1 promotes the proliferation, migration and invasion of nasopharyngeal carcinoma cells by upregulating LINC01160. (PMID:33263259)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.