LINC01179

Summary

LINC01179 (long intergenic non-protein coding RNA 1179, HGNC:49556) is a long non-coding RNA gene on chromosome 4q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49556
Approved symbol	LINC01179
Name	long intergenic non-protein coding RNA 1179
Location	4q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249500
Ensembl biotype	lncRNA
Entrez	101928151
RNAcentral	URS00004A2BD9 — lncRNA, 2163 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000507838

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000507838 — 6 exons

Exon	Start	End
ENSE00002020461	165684639	165684753
ENSE00002024858	165761256	165762778
ENSE00002032286	165685784	165685866
ENSE00002062570	165754801	165754986
ENSE00002069628	165733095	165733180
ENSE00002079374	165692176	165692345

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 71.24.

Top tissues by expression

19 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	71.24	silver quality
endometrium	UBERON:0001295	57.02	silver quality
skin of leg	UBERON:0001511	54.66	gold quality
tibial nerve	UBERON:0001323	49.25	gold quality
lymph node	UBERON:0000029	48.40	silver quality
hypothalamus	UBERON:0001898	48.10	silver quality
multicellular organism	UBERON:0000468	47.80	silver quality
vermiform appendix	UBERON:0001154	47.42	silver quality
nucleus accumbens	UBERON:0001882	45.49	silver quality
adult mammalian kidney	UBERON:0000082	43.29	silver quality
omental fat pad	UBERON:0010414	41.84	silver quality
cerebellar cortex	UBERON:0002129	41.60	silver quality
cerebellar hemisphere	UBERON:0002245	41.25	silver quality
right hemisphere of cerebellum	UBERON:0014890	40.87	silver quality
subcutaneous adipose tissue	UBERON:0002190	40.50	silver quality
ascending aorta	UBERON:0001496	39.86	silver quality
heart left ventricle	UBERON:0002084	39.67	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	37.89	silver quality
prostate gland	UBERON:0002367	33.80	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.09

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.