LINC01201

Summary

LINC01201 (long intergenic non-protein coding RNA 1201, HGNC:49632) is a long non-coding RNA gene on chromosome Xq26.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49632
Approved symbol	LINC01201
Name	long intergenic non-protein coding RNA 1201
Location	Xq26.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00017091
Ensembl gene	ENSG00000228659
Ensembl biotype	lncRNA
Entrez	104266960
RNAcentral	URS00003FFAF2 — lncRNA, 294 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000412420, ENST00000451431, ENST00000814912

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412420 — 3 exons

Exon	Start	End
ENSE00001719092	131039713	131039853
ENSE00001774087	131058047	131058146
ENSE00001789307	131016469	131016521

Expression profiles

Bgee: expression breadth broad, 42 present calls, max score 76.03.

Top tissues by expression

42 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortical plate	UBERON:0005343	76.03	gold quality
pituitary gland	UBERON:0000007	70.08	gold quality
monocyte	CL:0000576	69.42	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.31	gold quality
adenohypophysis	UBERON:0002196	68.04	gold quality
prefrontal cortex	UBERON:0000451	62.23	gold quality
hypothalamus	UBERON:0001898	59.61	gold quality
adrenal tissue	UBERON:0018303	59.54	gold quality
gastrocnemius	UBERON:0001388	57.71	gold quality
placenta	UBERON:0001987	55.98	gold quality
Ammon’s horn	UBERON:0001954	55.28	gold quality
tibial artery	UBERON:0007610	53.82	gold quality
blood	UBERON:0000178	53.53	silver quality
Brodmann (1909) area 9	UBERON:0013540	51.45	gold quality
nucleus accumbens	UBERON:0001882	50.62	gold quality
amygdala	UBERON:0001876	50.42	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	49.57	gold quality
substantia nigra	UBERON:0002038	49.11	gold quality
colon	UBERON:0001155	48.85	gold quality
cerebellar cortex	UBERON:0002129	47.92	gold quality
vagina	UBERON:0000996	47.76	gold quality
body of pancreas	UBERON:0001150	47.34	gold quality
right frontal lobe	UBERON:0002810	46.94	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.93	gold quality
right hemisphere of cerebellum	UBERON:0014890	46.48	gold quality
tibial nerve	UBERON:0001323	45.94	gold quality
left adrenal gland	UBERON:0001234	45.42	gold quality
lower esophagus muscularis layer	UBERON:0035833	45.34	gold quality
anterior cingulate cortex	UBERON:0009835	45.13	gold quality
caudate nucleus	UBERON:0001873	44.63	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.