LINC01217

Summary

LINC01217 (long intergenic non-protein coding RNA 1217, HGNC:41419) is a long non-coding RNA gene on chromosome 4q24.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41419
Approved symbol	LINC01217
Name	long intergenic non-protein coding RNA 1217
Location	4q24
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251219
Ensembl biotype	lncRNA
Entrez	100874276
RNAcentral	URS0000EF70C4 — lncRNA, 2562 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000514427, ENST00000657311

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514427 — 2 exons

Exon	Start	End
ENSE00002027889	100791170	100791235
ENSE00002082783	100778582	100779077

Expression profiles

Bgee: expression breadth broad, 48 present calls, max score 71.07.

Top tissues by expression

48 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	71.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.25	gold quality
ventricular zone	UBERON:0003053	56.63	silver quality
monocyte	CL:0000576	54.69	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.16	gold quality
blood	UBERON:0000178	50.89	silver quality
muscle of leg	UBERON:0001383	50.80	gold quality
prefrontal cortex	UBERON:0000451	50.41	gold quality
cortex of kidney	UBERON:0001225	47.93	silver quality
gastrocnemius	UBERON:0001388	47.72	silver quality
thyroid gland	UBERON:0002046	47.53	gold quality
Ammon’s horn	UBERON:0001954	45.54	silver quality
cerebellar hemisphere	UBERON:0002245	45.34	silver quality
pituitary gland	UBERON:0000007	44.53	gold quality
right hemisphere of cerebellum	UBERON:0014890	43.60	silver quality
spleen	UBERON:0002106	43.46	silver quality
apex of heart	UBERON:0002098	43.38	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	43.30	silver quality
subcutaneous adipose tissue	UBERON:0002190	42.37	silver quality
esophagus	UBERON:0001043	42.29	gold quality
nucleus accumbens	UBERON:0001882	41.56	silver quality
caudate nucleus	UBERON:0001873	41.53	silver quality
anterior cingulate cortex	UBERON:0009835	41.53	gold quality
esophagus mucosa	UBERON:0002469	41.52	gold quality
putamen	UBERON:0001874	41.46	silver quality
body of uterus	UBERON:0009853	41.02	silver quality
tibial artery	UBERON:0007610	40.81	silver quality
lung	UBERON:0002048	40.59	silver quality
small intestine	UBERON:0002108	40.53	silver quality
adult mammalian kidney	UBERON:0000082	40.50	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.