LINC01219

Summary

LINC01219 (long intergenic non-protein coding RNA 1219, HGNC:49653) is a long non-coding RNA gene on chromosome 11p15.5.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49653
Approved symbol	LINC01219
Name	long intergenic non-protein coding RNA 1219
Location	11p15.5
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232987
Ensembl biotype	lncRNA
Entrez	104355220
RNAcentral	URS0000149553 — lncRNA, 722 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000418612, ENST00000733500, ENST00000733501, ENST00000733502, ENST00000733503

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000418612 — 3 exons

Exon	Start	End
ENSE00001685995	1991938	1992280
ENSE00004064892	1993255	1993672
ENSE00004064896	1990990	1991259

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 73.18.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	73.18	silver quality
right uterine tube	UBERON:0001302	71.30	gold quality
bone marrow cell	CL:0002092	71.23	silver quality
skeletal muscle tissue	UBERON:0001134	68.97	gold quality
skin of leg	UBERON:0001511	66.71	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.57	gold quality
zone of skin	UBERON:0000014	66.42	gold quality
skin of abdomen	UBERON:0001416	66.14	gold quality
muscle of leg	UBERON:0001383	65.71	gold quality
gastrocnemius	UBERON:0001388	65.34	gold quality
body of pancreas	UBERON:0001150	64.10	gold quality
pancreas	UBERON:0001264	63.03	gold quality
mucosa of stomach	UBERON:0001199	62.45	gold quality
right frontal lobe	UBERON:0002810	62.02	gold quality
cortical plate	UBERON:0005343	61.14	gold quality
cerebellar hemisphere	UBERON:0002245	60.92	gold quality
cerebellar cortex	UBERON:0002129	60.87	gold quality
cerebellum	UBERON:0002037	60.85	gold quality
myometrium	UBERON:0001296	60.79	gold quality
right hemisphere of cerebellum	UBERON:0014890	60.27	gold quality
primary visual cortex	UBERON:0002436	59.93	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.93	gold quality
liver	UBERON:0002107	59.82	gold quality
right lobe of liver	UBERON:0001114	59.74	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	58.88	gold quality
frontal cortex	UBERON:0001870	58.77	gold quality
lower esophagus muscularis layer	UBERON:0035833	58.47	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	58.42	gold quality
body of uterus	UBERON:0009853	58.40	gold quality
lower esophagus	UBERON:0013473	58.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.