LINC01255

Summary

LINC01255 (long intergenic non-protein coding RNA 1255, HGNC:49871) is a long non-coding RNA gene on chromosome 18p11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49871
Approved symbol	LINC01255
Name	long intergenic non-protein coding RNA 1255
Location	18p11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267252
Ensembl biotype	lncRNA
Entrez	101927433
RNAcentral	URS000075D667 — lncRNA, 526 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 64 — 64 lncRNA

ENST00000586145, ENST00000586947, ENST00000587189, ENST00000589566, ENST00000591318, ENST00000591431, ENST00000654285, ENST00000654376, ENST00000655180, ENST00000655334, ENST00000655487, ENST00000656057, ENST00000656361, ENST00000657252, ENST00000658156, ENST00000658793, ENST00000659316, ENST00000659512, ENST00000660761, ENST00000660965, ENST00000661251, ENST00000661687, ENST00000661916, ENST00000663415, ENST00000663721, ENST00000664285, ENST00000664427, ENST00000664813, ENST00000665083, ENST00000665383, ENST00000665603, ENST00000665636, ENST00000666178, ENST00000666190, ENST00000666911, ENST00000668070, ENST00000668120, ENST00000669156, ENST00000669406, ENST00000670553, ENST00000827562, ENST00000827563, ENST00000827564, ENST00000827565, ENST00000827566, ENST00000827567, ENST00000827568, ENST00000827569, ENST00000827570, ENST00000827571, ENST00000827572, ENST00000827573, ENST00000827574, ENST00000827575, ENST00000827576, ENST00000827577, ENST00000827578, ENST00000827579, ENST00000827580, ENST00000827581, ENST00000827582, ENST00000827583, ENST00000827584, ENST00000827585

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586145 — 3 exons

Exon	Start	End
ENSE00002837011	11506757	11506968
ENSE00002881021	11505779	11505924
ENSE00002973004	11506532	11506636

Expression profiles

Bgee: expression breadth broad, 85 present calls, max score 99.09.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0338 / max 29.7716, expressed in 3 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
169424	0.0189	3
169426	0.0077	3
169425	0.0072	3

Top tissues by expression

199 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	99.09	gold quality
sperm	CL:0000019	92.44	gold quality
left testis	UBERON:0004533	89.96	gold quality
right testis	UBERON:0004534	89.02	gold quality
testis	UBERON:0000473	86.56	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.00	gold quality
colonic epithelium	UBERON:0000397	68.85	silver quality
ganglionic eminence	UBERON:0004023	58.44	gold quality
gingival epithelium	UBERON:0001949	58.31	gold quality
adult organism	UBERON:0007023	56.26	gold quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
sural nerve	UBERON:0015488	54.36	silver quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
monocyte	CL:0000576	54.08	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
epithelial cell of pancreas	CL:0000083	53.63	gold quality
upper lobe of lung	UBERON:0008948	53.61	silver quality
upper arm skin	UBERON:0004263	53.52	gold quality
lower lobe of lung	UBERON:0008949	53.32	silver quality
gingiva	UBERON:0001828	53.17	gold quality
adult mammalian kidney	UBERON:0000082	53.03	gold quality
right lobe of liver	UBERON:0001114	52.70	gold quality
nasal cavity epithelium	UBERON:0005384	52.21	gold quality
pancreatic ductal cell	CL:0002079	51.59	silver quality
bone marrow	UBERON:0002371	51.57	gold quality
gastrocnemius	UBERON:0001388	50.56	gold quality
myocardium	UBERON:0002349	50.25	gold quality
tonsil	UBERON:0002372	50.25	gold quality
deltoid	UBERON:0001476	49.90	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.08

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.