LINC01256

Summary

LINC01256 (long intergenic non-protein coding RNA 1256, HGNC:49895) is a long non-coding RNA gene on chromosome 4q28.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49895
Approved symbol	LINC01256
Name	long intergenic non-protein coding RNA 1256
Location	4q28.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_l2_00021715
Ensembl gene	ENSG00000251398
Ensembl biotype	lncRNA
Entrez	104355285
RNAcentral	URS00007E45C1 — lncRNA, 518 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000513270, ENST00000667267

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000513270 — 4 exons

Exon	Start	End
ENSE00002036999	132678423	132678503
ENSE00002066564	132662262	132662365
ENSE00002070050	132591089	132591276
ENSE00002074592	132644708	132644842

Expression profiles

Bgee: expression breadth broad, 27 present calls, max score 90.55.

Top tissues by expression

27 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.55	gold quality
islet of Langerhans	UBERON:0000006	53.71	gold quality
blood	UBERON:0000178	53.54	silver quality
monocyte	CL:0000576	51.64	silver quality
putamen	UBERON:0001874	48.25	gold quality
ascending aorta	UBERON:0001496	47.14	gold quality
calcaneal tendon	UBERON:0003701	45.82	silver quality
right testis	UBERON:0004534	45.41	gold quality
testis	UBERON:0000473	44.51	gold quality
omental fat pad	UBERON:0010414	44.30	gold quality
left testis	UBERON:0004533	44.26	gold quality
gastrocnemius	UBERON:0001388	44.24	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	44.05	gold quality
tibial artery	UBERON:0007610	42.13	silver quality
substantia nigra	UBERON:0002038	41.97	silver quality
Ammon’s horn	UBERON:0001954	40.20	silver quality
right atrium auricular region	UBERON:0006631	40.15	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	39.88	silver quality
tibial nerve	UBERON:0001323	39.69	silver quality
subcutaneous adipose tissue	UBERON:0002190	37.92	silver quality
skin of abdomen	UBERON:0001416	37.52	silver quality
caudate nucleus	UBERON:0001873	36.71	silver quality
right frontal lobe	UBERON:0002810	36.30	silver quality
right ovary	UBERON:0002118	36.02	silver quality
nucleus accumbens	UBERON:0001882	35.54	silver quality
pituitary gland	UBERON:0000007	35.38	silver quality
vagina	UBERON:0000996	34.93	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.